Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nup98Q6PFD9 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Nup98Q6PFD9 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nup98Q6PFD9 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nup98Q6PFD9 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nup98Q6PFD9 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nup98Q6PFD9 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nup98Q6PFD9 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nup98Q6PFD9 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nup98Q6PFD9 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nup98Q6PFD9 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nup98Q6PFD9 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nup98Q6PFD9 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nup98Q6PFD9 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC15.8■□□□□ 0.12
Nup98Q6PFD9 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nup98Q6PFD9 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC15.8■□□□□ 0.12
Nup98Q6PFD9 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC15.8■□□□□ 0.12
Nup98Q6PFD9 CT485787.1-201ENSMUST00000225617 968 ntBASIC15.8■□□□□ 0.12
Nup98Q6PFD9 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nup98Q6PFD9 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nup98Q6PFD9 n-R5s77-201ENSMUST00000083757 119 ntBASIC15.8■□□□□ 0.12
Nup98Q6PFD9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Nup98Q6PFD9 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nup98Q6PFD9 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Nup98Q6PFD9 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nup98Q6PFD9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nup98Q6PFD9 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nup98Q6PFD9 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nup98Q6PFD9 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nup98Q6PFD9 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nup98Q6PFD9 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.8■□□□□ 0.12
Nup98Q6PFD9 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nup98Q6PFD9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.8■□□□□ 0.12
Nup98Q6PFD9 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Nup98Q6PFD9 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nup98Q6PFD9 Gm15370-201ENSMUST00000117158 253 ntBASIC15.8■□□□□ 0.12
Nup98Q6PFD9 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC15.8■□□□□ 0.12
Nup98Q6PFD9 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Nup98Q6PFD9 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nup98Q6PFD9 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC15.8■□□□□ 0.12
Nup98Q6PFD9 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC15.8■□□□□ 0.12
Nup98Q6PFD9 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC15.8■□□□□ 0.12
Nup98Q6PFD9 Cts7-204ENSMUST00000225321 1257 ntBASIC15.8■□□□□ 0.12
Nup98Q6PFD9 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Nup98Q6PFD9 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nup98Q6PFD9 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nup98Q6PFD9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nup98Q6PFD9 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nup98Q6PFD9 Gm37827-201ENSMUST00000194486 1542 ntBASIC15.79■□□□□ 0.12
Nup98Q6PFD9 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nup98Q6PFD9 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nup98Q6PFD9 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nup98Q6PFD9 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Nup98Q6PFD9 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nup98Q6PFD9 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nup98Q6PFD9 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Nup98Q6PFD9 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nup98Q6PFD9 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nup98Q6PFD9 Gm15897-201ENSMUST00000117770 1486 ntBASIC15.79■□□□□ 0.12
Nup98Q6PFD9 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nup98Q6PFD9 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nup98Q6PFD9 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Nup98Q6PFD9 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nup98Q6PFD9 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Nup98Q6PFD9 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC15.79■□□□□ 0.12
Nup98Q6PFD9 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nup98Q6PFD9 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nup98Q6PFD9 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nup98Q6PFD9 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Nup98Q6PFD9 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nup98Q6PFD9 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nup98Q6PFD9 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Nup98Q6PFD9 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nup98Q6PFD9 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nup98Q6PFD9 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nup98Q6PFD9 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Nup98Q6PFD9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Nup98Q6PFD9 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nup98Q6PFD9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nup98Q6PFD9 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nup98Q6PFD9 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nup98Q6PFD9 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Nup98Q6PFD9 Gm14704-201ENSMUST00000120300 874 ntBASIC15.78■□□□□ 0.12
Nup98Q6PFD9 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Nup98Q6PFD9 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nup98Q6PFD9 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC15.78■□□□□ 0.12
Nup98Q6PFD9 AC159747.1-201ENSMUST00000219903 265 ntBASIC15.78■□□□□ 0.12
Nup98Q6PFD9 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nup98Q6PFD9 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nup98Q6PFD9 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Nup98Q6PFD9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nup98Q6PFD9 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nup98Q6PFD9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nup98Q6PFD9 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nup98Q6PFD9 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nup98Q6PFD9 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nup98Q6PFD9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nup98Q6PFD9 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Nup98Q6PFD9 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nup98Q6PFD9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms