Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcc2Q6PDG5 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcc2Q6PDG5 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Smarcc2Q6PDG5 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcc2Q6PDG5 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC15.91■□□□□ 0.14
Smarcc2Q6PDG5 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC15.91■□□□□ 0.14
Smarcc2Q6PDG5 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC15.91■□□□□ 0.14
Smarcc2Q6PDG5 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcc2Q6PDG5 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC15.91■□□□□ 0.14
Smarcc2Q6PDG5 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC15.91■□□□□ 0.14
Smarcc2Q6PDG5 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcc2Q6PDG5 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC15.91■□□□□ 0.14
Smarcc2Q6PDG5 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcc2Q6PDG5 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcc2Q6PDG5 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcc2Q6PDG5 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcc2Q6PDG5 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcc2Q6PDG5 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC15.91■□□□□ 0.14
Smarcc2Q6PDG5 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Smarcc2Q6PDG5 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcc2Q6PDG5 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC15.91■□□□□ 0.14
Smarcc2Q6PDG5 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcc2Q6PDG5 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcc2Q6PDG5 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcc2Q6PDG5 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcc2Q6PDG5 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Smarcc2Q6PDG5 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Smarcc2Q6PDG5 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcc2Q6PDG5 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcc2Q6PDG5 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcc2Q6PDG5 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC15.9■□□□□ 0.14
Smarcc2Q6PDG5 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcc2Q6PDG5 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.9■□□□□ 0.14
Smarcc2Q6PDG5 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC15.9■□□□□ 0.14
Smarcc2Q6PDG5 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcc2Q6PDG5 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.9■□□□□ 0.14
Smarcc2Q6PDG5 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcc2Q6PDG5 Gm24420-201ENSMUST00000176676 59 ntBASIC15.9■□□□□ 0.14
Smarcc2Q6PDG5 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC15.9■□□□□ 0.14
Smarcc2Q6PDG5 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Smarcc2Q6PDG5 Gm5425-201ENSMUST00000214125 459 ntBASIC15.9■□□□□ 0.14
Smarcc2Q6PDG5 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC15.9■□□□□ 0.14
Smarcc2Q6PDG5 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC15.9■□□□□ 0.14
Smarcc2Q6PDG5 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC15.9■□□□□ 0.14
Smarcc2Q6PDG5 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcc2Q6PDG5 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcc2Q6PDG5 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcc2Q6PDG5 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcc2Q6PDG5 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcc2Q6PDG5 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcc2Q6PDG5 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcc2Q6PDG5 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcc2Q6PDG5 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
Smarcc2Q6PDG5 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcc2Q6PDG5 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcc2Q6PDG5 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
Smarcc2Q6PDG5 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcc2Q6PDG5 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcc2Q6PDG5 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Smarcc2Q6PDG5 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcc2Q6PDG5 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcc2Q6PDG5 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcc2Q6PDG5 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcc2Q6PDG5 Gm38346-201ENSMUST00000192379 2639 ntBASIC15.89■□□□□ 0.13
Smarcc2Q6PDG5 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcc2Q6PDG5 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcc2Q6PDG5 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Smarcc2Q6PDG5 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcc2Q6PDG5 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC15.89■□□□□ 0.13
Smarcc2Q6PDG5 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcc2Q6PDG5 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Smarcc2Q6PDG5 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcc2Q6PDG5 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
Smarcc2Q6PDG5 Gm31326-201ENSMUST00000191856 1048 ntBASIC15.89■□□□□ 0.13
Smarcc2Q6PDG5 AL593843.1-201ENSMUST00000195891 145 ntBASIC15.89■□□□□ 0.13
Smarcc2Q6PDG5 AC131997.1-201ENSMUST00000228611 1229 ntBASIC15.89■□□□□ 0.13
Smarcc2Q6PDG5 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcc2Q6PDG5 Gm14452-201ENSMUST00000118680 1632 ntBASIC15.89■□□□□ 0.13
Smarcc2Q6PDG5 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcc2Q6PDG5 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcc2Q6PDG5 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcc2Q6PDG5 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcc2Q6PDG5 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC15.89■□□□□ 0.13
Smarcc2Q6PDG5 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Smarcc2Q6PDG5 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcc2Q6PDG5 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcc2Q6PDG5 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcc2Q6PDG5 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Smarcc2Q6PDG5 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcc2Q6PDG5 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcc2Q6PDG5 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC15.88■□□□□ 0.13
Smarcc2Q6PDG5 Gm13859-201ENSMUST00000119936 1423 ntBASIC15.88■□□□□ 0.13
Smarcc2Q6PDG5 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcc2Q6PDG5 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC15.88■□□□□ 0.13
Smarcc2Q6PDG5 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcc2Q6PDG5 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Smarcc2Q6PDG5 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
Smarcc2Q6PDG5 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC15.88■□□□□ 0.13
Smarcc2Q6PDG5 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC15.88■□□□□ 0.13
Smarcc2Q6PDG5 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms