Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd3Q6P9Z1 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd3Q6P9Z1 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd3Q6P9Z1 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd3Q6P9Z1 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd3Q6P9Z1 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd3Q6P9Z1 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd3Q6P9Z1 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd3Q6P9Z1 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd3Q6P9Z1 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smarcd3Q6P9Z1 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smarcd3Q6P9Z1 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Smarcd3Q6P9Z1 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.52□□□□□ -0.4
Smarcd3Q6P9Z1 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smarcd3Q6P9Z1 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smarcd3Q6P9Z1 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smarcd3Q6P9Z1 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.52□□□□□ -0.41
Smarcd3Q6P9Z1 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smarcd3Q6P9Z1 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smarcd3Q6P9Z1 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smarcd3Q6P9Z1 Gm4995-201ENSMUST00000117247 432 ntBASIC12.52□□□□□ -0.41
Smarcd3Q6P9Z1 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smarcd3Q6P9Z1 Gm25925-201ENSMUST00000158314 306 ntBASIC12.52□□□□□ -0.41
Smarcd3Q6P9Z1 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smarcd3Q6P9Z1 Gm18766-201ENSMUST00000189811 808 ntBASIC12.52□□□□□ -0.41
Smarcd3Q6P9Z1 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.52□□□□□ -0.41
Smarcd3Q6P9Z1 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.52□□□□□ -0.41
Smarcd3Q6P9Z1 Gm43125-201ENSMUST00000201724 730 ntBASIC12.52□□□□□ -0.41
Smarcd3Q6P9Z1 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smarcd3Q6P9Z1 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.52□□□□□ -0.41
Smarcd3Q6P9Z1 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smarcd3Q6P9Z1 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Smarcd3Q6P9Z1 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smarcd3Q6P9Z1 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smarcd3Q6P9Z1 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smarcd3Q6P9Z1 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smarcd3Q6P9Z1 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.52□□□□□ -0.41
Smarcd3Q6P9Z1 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smarcd3Q6P9Z1 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smarcd3Q6P9Z1 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smarcd3Q6P9Z1 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smarcd3Q6P9Z1 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smarcd3Q6P9Z1 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smarcd3Q6P9Z1 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smarcd3Q6P9Z1 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smarcd3Q6P9Z1 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smarcd3Q6P9Z1 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Smarcd3Q6P9Z1 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smarcd3Q6P9Z1 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Gm24513-201ENSMUST00000174964 138 ntBASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Gm27397-201ENSMUST00000184997 107 ntBASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Smarcd3Q6P9Z1 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcd3Q6P9Z1 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcd3Q6P9Z1 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcd3Q6P9Z1 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms