Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sp140Q6NSQ5 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sp140Q6NSQ5 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.85□□□□□ -0.19
Sp140Q6NSQ5 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Sp140Q6NSQ5 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sp140Q6NSQ5 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sp140Q6NSQ5 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sp140Q6NSQ5 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Sp140Q6NSQ5 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sp140Q6NSQ5 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sp140Q6NSQ5 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sp140Q6NSQ5 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Sp140Q6NSQ5 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
Sp140Q6NSQ5 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Sp140Q6NSQ5 Gm6912-201ENSMUST00000117218 544 ntBASIC13.85□□□□□ -0.19
Sp140Q6NSQ5 Gm15240-201ENSMUST00000118156 720 ntBASIC13.85□□□□□ -0.19
Sp140Q6NSQ5 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.85□□□□□ -0.19
Sp140Q6NSQ5 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.85□□□□□ -0.19
Sp140Q6NSQ5 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sp140Q6NSQ5 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sp140Q6NSQ5 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sp140Q6NSQ5 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.85□□□□□ -0.19
Sp140Q6NSQ5 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.85□□□□□ -0.19
Sp140Q6NSQ5 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.85□□□□□ -0.19
Sp140Q6NSQ5 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sp140Q6NSQ5 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sp140Q6NSQ5 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sp140Q6NSQ5 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sp140Q6NSQ5 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Sp140Q6NSQ5 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sp140Q6NSQ5 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sp140Q6NSQ5 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Sp140Q6NSQ5 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sp140Q6NSQ5 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.85□□□□□ -0.19
Sp140Q6NSQ5 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.85□□□□□ -0.19
Sp140Q6NSQ5 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sp140Q6NSQ5 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sp140Q6NSQ5 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sp140Q6NSQ5 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sp140Q6NSQ5 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sp140Q6NSQ5 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sp140Q6NSQ5 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sp140Q6NSQ5 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sp140Q6NSQ5 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sp140Q6NSQ5 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sp140Q6NSQ5 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sp140Q6NSQ5 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sp140Q6NSQ5 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.84□□□□□ -0.19
Sp140Q6NSQ5 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sp140Q6NSQ5 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.84□□□□□ -0.19
Sp140Q6NSQ5 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.84□□□□□ -0.19
Sp140Q6NSQ5 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sp140Q6NSQ5 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sp140Q6NSQ5 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sp140Q6NSQ5 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.84□□□□□ -0.19
Sp140Q6NSQ5 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.84□□□□□ -0.19
Sp140Q6NSQ5 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.84□□□□□ -0.19
Sp140Q6NSQ5 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sp140Q6NSQ5 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sp140Q6NSQ5 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.84□□□□□ -0.19
Sp140Q6NSQ5 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sp140Q6NSQ5 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Sp140Q6NSQ5 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sp140Q6NSQ5 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sp140Q6NSQ5 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Sp140Q6NSQ5 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Sp140Q6NSQ5 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sp140Q6NSQ5 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Sp140Q6NSQ5 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sp140Q6NSQ5 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sp140Q6NSQ5 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sp140Q6NSQ5 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Sp140Q6NSQ5 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Sp140Q6NSQ5 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sp140Q6NSQ5 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Sp140Q6NSQ5 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sp140Q6NSQ5 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sp140Q6NSQ5 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sp140Q6NSQ5 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sp140Q6NSQ5 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sp140Q6NSQ5 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sp140Q6NSQ5 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms