Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
AtmQ62388 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AtmQ62388 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.61□□□□□ -0.39
AtmQ62388 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.61□□□□□ -0.39
AtmQ62388 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
AtmQ62388 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.61□□□□□ -0.39
AtmQ62388 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.61□□□□□ -0.39
AtmQ62388 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AtmQ62388 Gm16372-201ENSMUST00000073088 450 ntBASIC12.61□□□□□ -0.39
AtmQ62388 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
AtmQ62388 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AtmQ62388 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
AtmQ62388 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
AtmQ62388 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.61□□□□□ -0.39
AtmQ62388 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.61□□□□□ -0.39
AtmQ62388 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AtmQ62388 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AtmQ62388 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
AtmQ62388 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
AtmQ62388 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.61□□□□□ -0.39
AtmQ62388 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
AtmQ62388 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.61□□□□□ -0.39
AtmQ62388 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.61□□□□□ -0.39
AtmQ62388 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
AtmQ62388 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
AtmQ62388 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AtmQ62388 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.61□□□□□ -0.39
AtmQ62388 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AtmQ62388 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.61□□□□□ -0.39
AtmQ62388 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
AtmQ62388 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AtmQ62388 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AtmQ62388 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
AtmQ62388 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
AtmQ62388 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AtmQ62388 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
AtmQ62388 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AtmQ62388 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AtmQ62388 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
AtmQ62388 Gm12403-201ENSMUST00000121384 959 ntBASIC12.6□□□□□ -0.39
AtmQ62388 Gm5070-201ENSMUST00000177599 862 ntBASIC12.6□□□□□ -0.39
AtmQ62388 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.6□□□□□ -0.39
AtmQ62388 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.6□□□□□ -0.39
AtmQ62388 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
AtmQ62388 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
AtmQ62388 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AtmQ62388 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.6□□□□□ -0.39
AtmQ62388 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.6□□□□□ -0.39
AtmQ62388 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
AtmQ62388 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AtmQ62388 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AtmQ62388 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AtmQ62388 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
AtmQ62388 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
AtmQ62388 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
AtmQ62388 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
AtmQ62388 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
AtmQ62388 Gm4768-201ENSMUST00000206199 686 ntBASIC12.6□□□□□ -0.39
AtmQ62388 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.6□□□□□ -0.39
AtmQ62388 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
AtmQ62388 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
AtmQ62388 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
AtmQ62388 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AtmQ62388 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
AtmQ62388 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.6□□□□□ -0.39
AtmQ62388 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AtmQ62388 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
AtmQ62388 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
AtmQ62388 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
AtmQ62388 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
AtmQ62388 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.6□□□□□ -0.39
AtmQ62388 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AtmQ62388 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
AtmQ62388 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.6□□□□□ -0.39
AtmQ62388 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC12.6□□□□□ -0.39
AtmQ62388 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.6□□□□□ -0.39
AtmQ62388 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
AtmQ62388 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
AtmQ62388 Gm8712-201ENSMUST00000221090 701 ntBASIC12.6□□□□□ -0.39
AtmQ62388 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
AtmQ62388 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AtmQ62388 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AtmQ62388 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
AtmQ62388 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
AtmQ62388 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.6□□□□□ -0.39
AtmQ62388 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
AtmQ62388 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AtmQ62388 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AtmQ62388 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AtmQ62388 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
AtmQ62388 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
AtmQ62388 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AtmQ62388 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
AtmQ62388 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
AtmQ62388 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.59□□□□□ -0.39
AtmQ62388 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.59□□□□□ -0.39
AtmQ62388 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
AtmQ62388 Gm45224-201ENSMUST00000208203 414 ntBASIC12.59□□□□□ -0.39
AtmQ62388 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AtmQ62388 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms