Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gli3Q61602 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gli3Q61602 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gli3Q61602 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gli3Q61602 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gli3Q61602 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gli3Q61602 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Gli3Q61602 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gli3Q61602 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gli3Q61602 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gli3Q61602 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Gli3Q61602 Gm12015-201ENSMUST00000117065 843 ntBASIC17.91■□□□□ 0.46
Gli3Q61602 Mup-ps26-201ENSMUST00000121751 202 ntBASIC17.91■□□□□ 0.46
Gli3Q61602 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC17.91■□□□□ 0.46
Gli3Q61602 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Gli3Q61602 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gli3Q61602 Gm29615-201ENSMUST00000185371 697 ntBASIC17.91■□□□□ 0.46
Gli3Q61602 Gm28224-201ENSMUST00000186078 697 ntBASIC17.91■□□□□ 0.46
Gli3Q61602 Gm29001-201ENSMUST00000186177 697 ntBASIC17.91■□□□□ 0.46
Gli3Q61602 Gm28292-201ENSMUST00000186593 697 ntBASIC17.91■□□□□ 0.46
Gli3Q61602 Gm28101-201ENSMUST00000187608 697 ntBASIC17.91■□□□□ 0.46
Gli3Q61602 Gm29076-201ENSMUST00000187689 697 ntBASIC17.91■□□□□ 0.46
Gli3Q61602 Gm28302-201ENSMUST00000187931 697 ntBASIC17.91■□□□□ 0.46
Gli3Q61602 Gm28646-201ENSMUST00000188220 697 ntBASIC17.91■□□□□ 0.46
Gli3Q61602 Gm28205-201ENSMUST00000189177 697 ntBASIC17.91■□□□□ 0.46
Gli3Q61602 Gm29032-201ENSMUST00000189797 697 ntBASIC17.91■□□□□ 0.46
Gli3Q61602 Gm28695-201ENSMUST00000190300 697 ntBASIC17.91■□□□□ 0.46
Gli3Q61602 Gm37448-201ENSMUST00000192795 697 ntBASIC17.91■□□□□ 0.46
Gli3Q61602 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Gli3Q61602 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC17.91■□□□□ 0.46
Gli3Q61602 AC153505.1-201ENSMUST00000218819 1071 ntBASIC17.91■□□□□ 0.46
Gli3Q61602 Gm21027-201ENSMUST00000219300 1236 ntBASIC17.91■□□□□ 0.46
Gli3Q61602 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC17.91■□□□□ 0.46
Gli3Q61602 Gm1821-202ENSMUST00000227415 750 ntBASIC17.91■□□□□ 0.46
Gli3Q61602 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gli3Q61602 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gli3Q61602 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gli3Q61602 Gm43205-201ENSMUST00000198622 1968 ntBASIC17.9■□□□□ 0.46
Gli3Q61602 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC17.9■□□□□ 0.46
Gli3Q61602 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Gli3Q61602 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gli3Q61602 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC17.9■□□□□ 0.46
Gli3Q61602 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gli3Q61602 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Gli3Q61602 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gli3Q61602 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gli3Q61602 Gm9873-201ENSMUST00000063891 1097 ntBASIC17.9■□□□□ 0.46
Gli3Q61602 Mir219a-1-201ENSMUST00000083621 110 ntBASIC17.9■□□□□ 0.46
Gli3Q61602 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gli3Q61602 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC17.9■□□□□ 0.46
Gli3Q61602 Gm38102-201ENSMUST00000192791 1935 ntBASIC17.9■□□□□ 0.46
Gli3Q61602 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gli3Q61602 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gli3Q61602 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gli3Q61602 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gli3Q61602 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Gli3Q61602 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Gli3Q61602 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Gli3Q61602 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.46
Gli3Q61602 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.89■□□□□ 0.45
Gli3Q61602 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gli3Q61602 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Gli3Q61602 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gli3Q61602 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Gli3Q61602 Gm7851-201ENSMUST00000117574 323 ntBASIC17.89■□□□□ 0.45
Gli3Q61602 Gm11801-201ENSMUST00000117807 746 ntBASIC17.89■□□□□ 0.45
Gli3Q61602 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC17.89■□□□□ 0.45
Gli3Q61602 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC17.89■□□□□ 0.45
Gli3Q61602 Gm7902-201ENSMUST00000198842 947 ntBASIC17.89■□□□□ 0.45
Gli3Q61602 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gli3Q61602 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gli3Q61602 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gli3Q61602 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC17.89■□□□□ 0.45
Gli3Q61602 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gli3Q61602 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gli3Q61602 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gli3Q61602 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.89■□□□□ 0.45
Gli3Q61602 CT009713.10-201ENSMUST00000225013 1986 ntBASIC17.89■□□□□ 0.45
Gli3Q61602 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Gli3Q61602 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gli3Q61602 AC122197.2-201ENSMUST00000219196 1635 ntBASIC17.89■□□□□ 0.45
Gli3Q61602 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gli3Q61602 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Gli3Q61602 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gli3Q61602 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gli3Q61602 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gli3Q61602 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Gli3Q61602 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gli3Q61602 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC17.88■□□□□ 0.45
Gli3Q61602 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gli3Q61602 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gli3Q61602 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC17.88■□□□□ 0.45
Gli3Q61602 Gm12969-201ENSMUST00000120199 1004 ntBASIC17.88■□□□□ 0.45
Gli3Q61602 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Gli3Q61602 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Gli3Q61602 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC17.88■□□□□ 0.45
Gli3Q61602 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC17.88■□□□□ 0.45
Gli3Q61602 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Gli3Q61602 AY036118-201ENSMUST00000200021 923 ntBASIC17.88■□□□□ 0.45
Gli3Q61602 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms