Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Six4Q61321 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Six4Q61321 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Six4Q61321 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Six4Q61321 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Six4Q61321 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Six4Q61321 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Six4Q61321 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Six4Q61321 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Six4Q61321 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Six4Q61321 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Six4Q61321 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Six4Q61321 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Six4Q61321 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Six4Q61321 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Six4Q61321 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Six4Q61321 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.76□□□□□ -0.21
Six4Q61321 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Six4Q61321 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Six4Q61321 Gm15678-201ENSMUST00000117573 960 ntBASIC13.76□□□□□ -0.21
Six4Q61321 Gm13689-201ENSMUST00000119360 685 ntBASIC13.76□□□□□ -0.21
Six4Q61321 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.76□□□□□ -0.21
Six4Q61321 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.76□□□□□ -0.21
Six4Q61321 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.76□□□□□ -0.21
Six4Q61321 Mir6392-201ENSMUST00000184924 108 ntBASIC13.76□□□□□ -0.21
Six4Q61321 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.76□□□□□ -0.21
Six4Q61321 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Six4Q61321 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.76□□□□□ -0.21
Six4Q61321 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Six4Q61321 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.76□□□□□ -0.21
Six4Q61321 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Six4Q61321 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.76□□□□□ -0.21
Six4Q61321 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Six4Q61321 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Six4Q61321 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Six4Q61321 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Six4Q61321 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Six4Q61321 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Six4Q61321 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Six4Q61321 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Six4Q61321 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Six4Q61321 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Six4Q61321 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Six4Q61321 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Six4Q61321 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Six4Q61321 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Six4Q61321 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.75□□□□□ -0.21
Six4Q61321 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Six4Q61321 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Six4Q61321 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Six4Q61321 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Six4Q61321 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Six4Q61321 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Six4Q61321 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Six4Q61321 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Six4Q61321 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.75□□□□□ -0.21
Six4Q61321 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Six4Q61321 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Six4Q61321 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.75□□□□□ -0.21
Six4Q61321 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.75□□□□□ -0.21
Six4Q61321 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.75□□□□□ -0.21
Six4Q61321 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.75□□□□□ -0.21
Six4Q61321 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Six4Q61321 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.75□□□□□ -0.21
Six4Q61321 Gm29608-201ENSMUST00000190444 463 ntBASIC13.75□□□□□ -0.21
Six4Q61321 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Six4Q61321 Gm17330-201ENSMUST00000221047 165 ntBASIC13.75□□□□□ -0.21
Six4Q61321 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.75□□□□□ -0.21
Six4Q61321 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Six4Q61321 Gm15823-201ENSMUST00000064305 670 ntBASIC13.75□□□□□ -0.21
Six4Q61321 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.75□□□□□ -0.21
Six4Q61321 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Six4Q61321 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Six4Q61321 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
Six4Q61321 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.75□□□□□ -0.21
Six4Q61321 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Six4Q61321 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Six4Q61321 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Six4Q61321 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Six4Q61321 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.75□□□□□ -0.21
Six4Q61321 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Six4Q61321 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.74□□□□□ -0.21
Six4Q61321 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Six4Q61321 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Six4Q61321 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Six4Q61321 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.74□□□□□ -0.21
Six4Q61321 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Six4Q61321 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Six4Q61321 Gm14928-201ENSMUST00000120198 477 ntBASIC13.74□□□□□ -0.21
Six4Q61321 Mir7654-201ENSMUST00000185082 70 ntBASIC13.74□□□□□ -0.21
Six4Q61321 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.74□□□□□ -0.21
Six4Q61321 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.74□□□□□ -0.21
Six4Q61321 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Six4Q61321 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.74□□□□□ -0.21
Six4Q61321 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.74□□□□□ -0.21
Six4Q61321 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Six4Q61321 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Six4Q61321 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Six4Q61321 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Six4Q61321 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms