Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC15.53■□□□□ 0.08
Ccdc88aQ5SNZ0 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC15.53■□□□□ 0.08
Ccdc88aQ5SNZ0 Gm37008-201ENSMUST00000195712 319 ntBASIC15.53■□□□□ 0.08
Ccdc88aQ5SNZ0 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Ccdc88aQ5SNZ0 Gm14752-201ENSMUST00000120719 2075 ntBASIC15.53■□□□□ 0.08
Ccdc88aQ5SNZ0 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc88aQ5SNZ0 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc88aQ5SNZ0 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc88aQ5SNZ0 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC15.53■□□□□ 0.08
Ccdc88aQ5SNZ0 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc88aQ5SNZ0 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc88aQ5SNZ0 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc88aQ5SNZ0 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc88aQ5SNZ0 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc88aQ5SNZ0 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc88aQ5SNZ0 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc88aQ5SNZ0 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC15.53■□□□□ 0.08
Ccdc88aQ5SNZ0 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc88aQ5SNZ0 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc88aQ5SNZ0 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.53■□□□□ 0.08
Ccdc88aQ5SNZ0 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.53■□□□□ 0.08
Ccdc88aQ5SNZ0 Gm37133-201ENSMUST00000192705 1922 ntBASIC15.52■□□□□ 0.08
Ccdc88aQ5SNZ0 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Ccdc88aQ5SNZ0 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC15.52■□□□□ 0.08
Ccdc88aQ5SNZ0 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc88aQ5SNZ0 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc88aQ5SNZ0 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC15.52■□□□□ 0.08
Ccdc88aQ5SNZ0 Gm42929-201ENSMUST00000198374 1286 ntBASIC15.52■□□□□ 0.08
Ccdc88aQ5SNZ0 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc88aQ5SNZ0 Tmed9-203ENSMUST00000224741 1450 ntBASIC15.52■□□□□ 0.08
Ccdc88aQ5SNZ0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Ccdc88aQ5SNZ0 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.52■□□□□ 0.08
Ccdc88aQ5SNZ0 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc88aQ5SNZ0 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc88aQ5SNZ0 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc88aQ5SNZ0 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc88aQ5SNZ0 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
Ccdc88aQ5SNZ0 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc88aQ5SNZ0 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Ccdc88aQ5SNZ0 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc88aQ5SNZ0 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC15.52■□□□□ 0.07
Ccdc88aQ5SNZ0 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC15.52■□□□□ 0.07
Ccdc88aQ5SNZ0 Gm15782-201ENSMUST00000121073 445 ntBASIC15.52■□□□□ 0.07
Ccdc88aQ5SNZ0 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC15.52■□□□□ 0.07
Ccdc88aQ5SNZ0 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.07
Ccdc88aQ5SNZ0 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc88aQ5SNZ0 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Ccdc88aQ5SNZ0 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Ccdc88aQ5SNZ0 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc88aQ5SNZ0 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc88aQ5SNZ0 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc88aQ5SNZ0 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc88aQ5SNZ0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc88aQ5SNZ0 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc88aQ5SNZ0 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc88aQ5SNZ0 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Ccdc88aQ5SNZ0 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc88aQ5SNZ0 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc88aQ5SNZ0 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc88aQ5SNZ0 Gm18630-201ENSMUST00000222109 1397 ntBASIC15.51■□□□□ 0.07
Ccdc88aQ5SNZ0 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.51■□□□□ 0.07
Ccdc88aQ5SNZ0 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc88aQ5SNZ0 Gm10156-201ENSMUST00000122364 462 ntBASIC15.51■□□□□ 0.07
Ccdc88aQ5SNZ0 Gm13786-201ENSMUST00000122371 333 ntBASIC15.51■□□□□ 0.07
Ccdc88aQ5SNZ0 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC15.51■□□□□ 0.07
Ccdc88aQ5SNZ0 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc88aQ5SNZ0 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Ccdc88aQ5SNZ0 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC15.51■□□□□ 0.07
Ccdc88aQ5SNZ0 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Ccdc88aQ5SNZ0 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc88aQ5SNZ0 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc88aQ5SNZ0 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC15.51■□□□□ 0.07
Ccdc88aQ5SNZ0 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc88aQ5SNZ0 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc88aQ5SNZ0 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Ccdc88aQ5SNZ0 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC15.51■□□□□ 0.07
Ccdc88aQ5SNZ0 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc88aQ5SNZ0 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc88aQ5SNZ0 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc88aQ5SNZ0 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.5■□□□□ 0.07
Ccdc88aQ5SNZ0 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc88aQ5SNZ0 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc88aQ5SNZ0 Gm7029-201ENSMUST00000173226 450 ntBASIC15.5■□□□□ 0.07
Ccdc88aQ5SNZ0 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc88aQ5SNZ0 AC093022.1-201ENSMUST00000226949 1072 ntBASIC15.5■□□□□ 0.07
Ccdc88aQ5SNZ0 Gm24447-201ENSMUST00000083977 338 ntBASIC15.5■□□□□ 0.07
Ccdc88aQ5SNZ0 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc88aQ5SNZ0 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc88aQ5SNZ0 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc88aQ5SNZ0 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC15.5■□□□□ 0.07
Ccdc88aQ5SNZ0 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc88aQ5SNZ0 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc88aQ5SNZ0 Gm13730-201ENSMUST00000121036 1462 ntBASIC15.5■□□□□ 0.07
Ccdc88aQ5SNZ0 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC15.5■□□□□ 0.07
Ccdc88aQ5SNZ0 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc88aQ5SNZ0 Gm12997-201ENSMUST00000120207 640 ntBASIC15.5■□□□□ 0.07
Ccdc88aQ5SNZ0 Gm5637-201ENSMUST00000153890 1119 ntBASIC15.5■□□□□ 0.07
Ccdc88aQ5SNZ0 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc88aQ5SNZ0 Gm7118-201ENSMUST00000200167 1003 ntBASIC15.5■□□□□ 0.07
Ccdc88aQ5SNZ0 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms