Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC11.75□□□□□ -0.53
Trav5d-4Q5R1F6 Gm4971-201ENSMUST00000205991 1108 ntBASIC11.75□□□□□ -0.53
Trav5d-4Q5R1F6 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.75□□□□□ -0.53
Trav5d-4Q5R1F6 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5d-4Q5R1F6 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trav5d-4Q5R1F6 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav5d-4Q5R1F6 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav5d-4Q5R1F6 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5d-4Q5R1F6 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav5d-4Q5R1F6 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Trav5d-4Q5R1F6 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5d-4Q5R1F6 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.75□□□□□ -0.53
Trav5d-4Q5R1F6 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5d-4Q5R1F6 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav5d-4Q5R1F6 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5d-4Q5R1F6 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav5d-4Q5R1F6 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav5d-4Q5R1F6 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav5d-4Q5R1F6 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 Gm4804-201ENSMUST00000182234 999 ntBASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 Gm10766-202ENSMUST00000194123 606 ntBASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav5d-4Q5R1F6 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav5d-4Q5R1F6 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav5d-4Q5R1F6 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav5d-4Q5R1F6 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav5d-4Q5R1F6 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav5d-4Q5R1F6 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav5d-4Q5R1F6 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav5d-4Q5R1F6 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav5d-4Q5R1F6 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav5d-4Q5R1F6 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav5d-4Q5R1F6 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav5d-4Q5R1F6 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.73□□□□□ -0.53
Trav5d-4Q5R1F6 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav5d-4Q5R1F6 Gm13385-201ENSMUST00000121089 220 ntBASIC11.73□□□□□ -0.53
Trav5d-4Q5R1F6 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav5d-4Q5R1F6 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.73□□□□□ -0.53
Trav5d-4Q5R1F6 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC11.73□□□□□ -0.53
Trav5d-4Q5R1F6 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav5d-4Q5R1F6 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav5d-4Q5R1F6 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav5d-4Q5R1F6 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav5d-4Q5R1F6 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav5d-4Q5R1F6 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav5d-4Q5R1F6 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav5d-4Q5R1F6 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav5d-4Q5R1F6 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav5d-4Q5R1F6 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav5d-4Q5R1F6 AC126408.1-201ENSMUST00000225184 523 ntBASIC11.73□□□□□ -0.53
Trav5d-4Q5R1F6 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav5d-4Q5R1F6 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav5d-4Q5R1F6 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav5d-4Q5R1F6 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC11.73□□□□□ -0.53
Trav5d-4Q5R1F6 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav5d-4Q5R1F6 Gm5867-201ENSMUST00000063197 592 ntBASIC11.73□□□□□ -0.53
Trav5d-4Q5R1F6 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trav5d-4Q5R1F6 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.73□□□□□ -0.53
Trav5d-4Q5R1F6 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav5d-4Q5R1F6 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav5d-4Q5R1F6 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms