Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
R3hdm4Q4VBF2 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.7□□□□□ -0.06
R3hdm4Q4VBF2 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
R3hdm4Q4VBF2 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
R3hdm4Q4VBF2 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.7□□□□□ -0.06
R3hdm4Q4VBF2 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
R3hdm4Q4VBF2 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
R3hdm4Q4VBF2 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
R3hdm4Q4VBF2 Gm12138-201ENSMUST00000122180 951 ntBASIC14.7□□□□□ -0.06
R3hdm4Q4VBF2 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
R3hdm4Q4VBF2 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
R3hdm4Q4VBF2 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
R3hdm4Q4VBF2 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
R3hdm4Q4VBF2 Gm9908-201ENSMUST00000211534 448 ntBASIC14.7□□□□□ -0.06
R3hdm4Q4VBF2 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.7□□□□□ -0.06
R3hdm4Q4VBF2 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
R3hdm4Q4VBF2 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
R3hdm4Q4VBF2 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
R3hdm4Q4VBF2 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
R3hdm4Q4VBF2 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
R3hdm4Q4VBF2 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
R3hdm4Q4VBF2 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
R3hdm4Q4VBF2 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
R3hdm4Q4VBF2 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
R3hdm4Q4VBF2 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
R3hdm4Q4VBF2 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
R3hdm4Q4VBF2 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
R3hdm4Q4VBF2 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
R3hdm4Q4VBF2 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
R3hdm4Q4VBF2 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
R3hdm4Q4VBF2 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
R3hdm4Q4VBF2 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
R3hdm4Q4VBF2 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
R3hdm4Q4VBF2 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
R3hdm4Q4VBF2 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
R3hdm4Q4VBF2 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
R3hdm4Q4VBF2 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
R3hdm4Q4VBF2 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
R3hdm4Q4VBF2 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
R3hdm4Q4VBF2 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.69□□□□□ -0.06
R3hdm4Q4VBF2 Gm6745-201ENSMUST00000199216 526 ntBASIC14.69□□□□□ -0.06
R3hdm4Q4VBF2 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
R3hdm4Q4VBF2 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
R3hdm4Q4VBF2 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.69□□□□□ -0.06
R3hdm4Q4VBF2 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.69□□□□□ -0.06
R3hdm4Q4VBF2 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.69□□□□□ -0.06
R3hdm4Q4VBF2 Gm17330-201ENSMUST00000221047 165 ntBASIC14.69□□□□□ -0.06
R3hdm4Q4VBF2 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.69□□□□□ -0.06
R3hdm4Q4VBF2 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
R3hdm4Q4VBF2 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
R3hdm4Q4VBF2 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
R3hdm4Q4VBF2 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
R3hdm4Q4VBF2 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
R3hdm4Q4VBF2 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.69□□□□□ -0.06
R3hdm4Q4VBF2 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
R3hdm4Q4VBF2 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
R3hdm4Q4VBF2 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
R3hdm4Q4VBF2 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
R3hdm4Q4VBF2 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
R3hdm4Q4VBF2 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
R3hdm4Q4VBF2 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
R3hdm4Q4VBF2 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
R3hdm4Q4VBF2 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.68□□□□□ -0.06
R3hdm4Q4VBF2 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
R3hdm4Q4VBF2 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
R3hdm4Q4VBF2 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
R3hdm4Q4VBF2 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.68□□□□□ -0.06
R3hdm4Q4VBF2 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.68□□□□□ -0.06
R3hdm4Q4VBF2 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
R3hdm4Q4VBF2 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
R3hdm4Q4VBF2 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
R3hdm4Q4VBF2 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
R3hdm4Q4VBF2 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
R3hdm4Q4VBF2 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
R3hdm4Q4VBF2 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
R3hdm4Q4VBF2 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
R3hdm4Q4VBF2 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
R3hdm4Q4VBF2 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.68□□□□□ -0.06
R3hdm4Q4VBF2 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.68□□□□□ -0.06
R3hdm4Q4VBF2 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.68□□□□□ -0.06
R3hdm4Q4VBF2 Gm8515-201ENSMUST00000194852 576 ntBASIC14.68□□□□□ -0.06
R3hdm4Q4VBF2 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
R3hdm4Q4VBF2 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.68□□□□□ -0.06
R3hdm4Q4VBF2 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.68□□□□□ -0.06
R3hdm4Q4VBF2 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
R3hdm4Q4VBF2 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
R3hdm4Q4VBF2 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
R3hdm4Q4VBF2 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
R3hdm4Q4VBF2 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
R3hdm4Q4VBF2 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
R3hdm4Q4VBF2 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
R3hdm4Q4VBF2 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
R3hdm4Q4VBF2 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
R3hdm4Q4VBF2 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
R3hdm4Q4VBF2 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
R3hdm4Q4VBF2 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
R3hdm4Q4VBF2 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
R3hdm4Q4VBF2 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
R3hdm4Q4VBF2 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
R3hdm4Q4VBF2 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms