Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Spg11Q3UHA3 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Spg11Q3UHA3 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Spg11Q3UHA3 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Spg11Q3UHA3 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Spg11Q3UHA3 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Spg11Q3UHA3 Gm15547-201ENSMUST00000122152 333 ntBASIC12.45□□□□□ -0.42
Spg11Q3UHA3 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC12.45□□□□□ -0.42
Spg11Q3UHA3 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC12.45□□□□□ -0.42
Spg11Q3UHA3 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.44□□□□□ -0.42
Spg11Q3UHA3 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Spg11Q3UHA3 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Spg11Q3UHA3 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Spg11Q3UHA3 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Spg11Q3UHA3 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Spg11Q3UHA3 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Spg11Q3UHA3 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Spg11Q3UHA3 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Spg11Q3UHA3 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Spg11Q3UHA3 Gm45550-201ENSMUST00000209380 946 ntBASIC12.44□□□□□ -0.42
Spg11Q3UHA3 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.44□□□□□ -0.42
Spg11Q3UHA3 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.44□□□□□ -0.42
Spg11Q3UHA3 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Spg11Q3UHA3 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Spg11Q3UHA3 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Spg11Q3UHA3 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Spg11Q3UHA3 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Spg11Q3UHA3 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Spg11Q3UHA3 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Spg11Q3UHA3 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Spg11Q3UHA3 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.44□□□□□ -0.42
Spg11Q3UHA3 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Spg11Q3UHA3 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Spg11Q3UHA3 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Spg11Q3UHA3 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Spg11Q3UHA3 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Spg11Q3UHA3 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Spg11Q3UHA3 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Mir6546-201ENSMUST00000184460 62 ntBASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Gm44651-201ENSMUST00000207343 372 ntBASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Gm12969-201ENSMUST00000120199 1004 ntBASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Gm2546-201ENSMUST00000182630 991 ntBASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Gm19287-201ENSMUST00000203190 358 ntBASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 AC159376.1-201ENSMUST00000218504 630 ntBASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Spg11Q3UHA3 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Spg11Q3UHA3 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Spg11Q3UHA3 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Spg11Q3UHA3 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Spg11Q3UHA3 Gm12948-201ENSMUST00000119406 682 ntBASIC12.42□□□□□ -0.42
Spg11Q3UHA3 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms