Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccbe1Q3MI99 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccbe1Q3MI99 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccbe1Q3MI99 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccbe1Q3MI99 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ccbe1Q3MI99 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccbe1Q3MI99 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccbe1Q3MI99 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ccbe1Q3MI99 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Ccbe1Q3MI99 Gm27867-201ENSMUST00000184778 125 ntBASIC12.33□□□□□ -0.44
Ccbe1Q3MI99 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.33□□□□□ -0.44
Ccbe1Q3MI99 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ccbe1Q3MI99 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.33□□□□□ -0.44
Ccbe1Q3MI99 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.33□□□□□ -0.44
Ccbe1Q3MI99 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.33□□□□□ -0.44
Ccbe1Q3MI99 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccbe1Q3MI99 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccbe1Q3MI99 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ccbe1Q3MI99 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccbe1Q3MI99 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
Ccbe1Q3MI99 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccbe1Q3MI99 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.33□□□□□ -0.44
Ccbe1Q3MI99 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Ccbe1Q3MI99 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccbe1Q3MI99 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccbe1Q3MI99 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccbe1Q3MI99 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccbe1Q3MI99 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ccbe1Q3MI99 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccbe1Q3MI99 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.33□□□□□ -0.44
Ccbe1Q3MI99 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccbe1Q3MI99 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccbe1Q3MI99 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccbe1Q3MI99 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ccbe1Q3MI99 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccbe1Q3MI99 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccbe1Q3MI99 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccbe1Q3MI99 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccbe1Q3MI99 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccbe1Q3MI99 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccbe1Q3MI99 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccbe1Q3MI99 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccbe1Q3MI99 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccbe1Q3MI99 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccbe1Q3MI99 Gm11594-201ENSMUST00000122313 162 ntBASIC12.32□□□□□ -0.44
Ccbe1Q3MI99 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccbe1Q3MI99 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccbe1Q3MI99 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccbe1Q3MI99 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccbe1Q3MI99 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.32□□□□□ -0.44
Ccbe1Q3MI99 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.32□□□□□ -0.44
Ccbe1Q3MI99 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.32□□□□□ -0.44
Ccbe1Q3MI99 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccbe1Q3MI99 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccbe1Q3MI99 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ccbe1Q3MI99 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccbe1Q3MI99 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Ccbe1Q3MI99 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccbe1Q3MI99 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccbe1Q3MI99 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccbe1Q3MI99 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccbe1Q3MI99 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccbe1Q3MI99 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccbe1Q3MI99 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Rprl3-201ENSMUST00000157400 290 ntBASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Mir5131-201ENSMUST00000175426 93 ntBASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Gm18195-201ENSMUST00000207604 706 ntBASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Gm8655-201ENSMUST00000221159 852 ntBASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms