Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim63Q38HM4 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim63Q38HM4 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim63Q38HM4 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trim63Q38HM4 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim63Q38HM4 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim63Q38HM4 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trim63Q38HM4 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim63Q38HM4 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.2□□□□□ -0.62
Trim63Q38HM4 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.2□□□□□ -0.62
Trim63Q38HM4 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim63Q38HM4 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim63Q38HM4 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trim63Q38HM4 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim63Q38HM4 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim63Q38HM4 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim63Q38HM4 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim63Q38HM4 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim63Q38HM4 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim63Q38HM4 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim63Q38HM4 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Trim63Q38HM4 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim63Q38HM4 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trim63Q38HM4 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim63Q38HM4 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim63Q38HM4 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim63Q38HM4 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trim63Q38HM4 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trim63Q38HM4 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim63Q38HM4 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim63Q38HM4 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trim63Q38HM4 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim63Q38HM4 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trim63Q38HM4 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC11.19□□□□□ -0.62
Trim63Q38HM4 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim63Q38HM4 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trim63Q38HM4 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.19□□□□□ -0.62
Trim63Q38HM4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trim63Q38HM4 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trim63Q38HM4 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim63Q38HM4 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trim63Q38HM4 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC11.19□□□□□ -0.62
Trim63Q38HM4 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trim63Q38HM4 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim63Q38HM4 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim63Q38HM4 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim63Q38HM4 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trim63Q38HM4 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trim63Q38HM4 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trim63Q38HM4 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trim63Q38HM4 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim63Q38HM4 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trim63Q38HM4 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim63Q38HM4 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim63Q38HM4 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim63Q38HM4 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim63Q38HM4 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim63Q38HM4 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim63Q38HM4 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim63Q38HM4 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim63Q38HM4 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim63Q38HM4 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim63Q38HM4 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim63Q38HM4 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim63Q38HM4 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim63Q38HM4 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.18□□□□□ -0.62
Trim63Q38HM4 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim63Q38HM4 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim63Q38HM4 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim63Q38HM4 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trim63Q38HM4 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Trim63Q38HM4 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trim63Q38HM4 Gm7213-201ENSMUST00000215977 950 ntBASIC11.18□□□□□ -0.62
Trim63Q38HM4 AC117588.1-201ENSMUST00000228510 999 ntBASIC11.18□□□□□ -0.62
Trim63Q38HM4 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim63Q38HM4 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim63Q38HM4 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim63Q38HM4 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Trim63Q38HM4 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim63Q38HM4 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trim63Q38HM4 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim63Q38HM4 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim63Q38HM4 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim63Q38HM4 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim63Q38HM4 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim63Q38HM4 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim63Q38HM4 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim63Q38HM4 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trim63Q38HM4 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trim63Q38HM4 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim63Q38HM4 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim63Q38HM4 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim63Q38HM4 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trim63Q38HM4 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trim63Q38HM4 Spsb2-203ENSMUST00000112473 1322 ntBASIC11.17□□□□□ -0.62
Trim63Q38HM4 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim63Q38HM4 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Trim63Q38HM4 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC11.17□□□□□ -0.62
Trim63Q38HM4 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC11.17□□□□□ -0.62
Trim63Q38HM4 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms