Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm18552-201ENSMUST00000187425 538 ntBASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Gm22058-201ENSMUST00000083393 310 ntBASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Gm6304-201ENSMUST00000096579 447 ntBASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 AC107763.1-201ENSMUST00000226082 1365 ntBASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Gm12712-201ENSMUST00000120676 801 ntBASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Gm17877-201ENSMUST00000192578 814 ntBASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Gm18968-201ENSMUST00000221319 862 ntBASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 AA623943-201ENSMUST00000121794 354 ntBASIC7.01□□□□□ -1.29
Ush2AQ2QI47 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Gm29763-201ENSMUST00000205306 616 ntBASIC7.01□□□□□ -1.29
Ush2AQ2QI47 AC133602.1-201ENSMUST00000227510 509 ntBASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Gm3287-205ENSMUST00000228893 1332 ntBASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Gm7789-202ENSMUST00000211273 1400 ntBASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Rprl1-201ENSMUST00000158050 327 ntBASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Gm24943-201ENSMUST00000158329 433 ntBASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Gm29808-201ENSMUST00000194419 468 ntBASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Zkscan14-203ENSMUST00000198959 2243 ntBASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC7□□□□□ -1.29
Ush2AQ2QI47 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Ush2AQ2QI47 Gm14644-201ENSMUST00000116671 647 ntBASIC7□□□□□ -1.29
Ush2AQ2QI47 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC7□□□□□ -1.29
Ush2AQ2QI47 Gm6485-201ENSMUST00000160676 439 ntBASIC7□□□□□ -1.29
Ush2AQ2QI47 Gm29410-201ENSMUST00000188383 694 ntBASIC7□□□□□ -1.29
Ush2AQ2QI47 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC7□□□□□ -1.29
Ush2AQ2QI47 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
Ush2AQ2QI47 Carlr-201ENSMUST00000181515 2574 ntBASIC7□□□□□ -1.29
Ush2AQ2QI47 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Ush2AQ2QI47 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Ush2AQ2QI47 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Ush2AQ2QI47 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC7□□□□□ -1.29
Ush2AQ2QI47 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Ush2AQ2QI47 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC7□□□□□ -1.29
Ush2AQ2QI47 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
Ush2AQ2QI47 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Ush2AQ2QI47 Mir698-201ENSMUST00000102164 109 ntBASIC7□□□□□ -1.29
Ush2AQ2QI47 Gm15770-201ENSMUST00000117498 584 ntBASIC7□□□□□ -1.29
Ush2AQ2QI47 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC7□□□□□ -1.29
Ush2AQ2QI47 Gm17070-201ENSMUST00000170463 784 ntBASIC7□□□□□ -1.29
Ush2AQ2QI47 Gm27675-201ENSMUST00000184527 94 ntBASIC7□□□□□ -1.29
Ush2AQ2QI47 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC7□□□□□ -1.29
Ush2AQ2QI47 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC7□□□□□ -1.29
Ush2AQ2QI47 BC106175-202ENSMUST00000219344 1213 ntBASIC7□□□□□ -1.29
Ush2AQ2QI47 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Ush2AQ2QI47 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
Ush2AQ2QI47 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Ush2AQ2QI47 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC7□□□□□ -1.29
Ush2AQ2QI47 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Ush2AQ2QI47 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC7□□□□□ -1.29
Ush2AQ2QI47 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Ush2AQ2QI47 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Ush2AQ2QI47 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Ush2AQ2QI47 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Ush2AQ2QI47 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Ush2AQ2QI47 Gm24954-201ENSMUST00000178831 110 ntBASIC7□□□□□ -1.29
Ush2AQ2QI47 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC7□□□□□ -1.29
Ush2AQ2QI47 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC7□□□□□ -1.29
Ush2AQ2QI47 Gm6905-201ENSMUST00000205729 511 ntBASIC7□□□□□ -1.29
Ush2AQ2QI47 Gm5904-201ENSMUST00000210286 865 ntBASIC7□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms