Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ptchd3Q0EEE2 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ptchd3Q0EEE2 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ptchd3Q0EEE2 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Ptchd3Q0EEE2 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ptchd3Q0EEE2 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ptchd3Q0EEE2 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ptchd3Q0EEE2 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ptchd3Q0EEE2 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.18□□□□□ -0.3
Ptchd3Q0EEE2 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.18□□□□□ -0.3
Ptchd3Q0EEE2 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.18□□□□□ -0.3
Ptchd3Q0EEE2 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.18□□□□□ -0.3
Ptchd3Q0EEE2 Gm2756-201ENSMUST00000195851 400 ntBASIC13.18□□□□□ -0.3
Ptchd3Q0EEE2 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ptchd3Q0EEE2 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.18□□□□□ -0.3
Ptchd3Q0EEE2 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.18□□□□□ -0.3
Ptchd3Q0EEE2 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.18□□□□□ -0.3
Ptchd3Q0EEE2 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.18□□□□□ -0.3
Ptchd3Q0EEE2 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ptchd3Q0EEE2 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.18□□□□□ -0.3
Ptchd3Q0EEE2 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ptchd3Q0EEE2 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ptchd3Q0EEE2 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Ptchd3Q0EEE2 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ptchd3Q0EEE2 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ptchd3Q0EEE2 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ptchd3Q0EEE2 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 Gm25925-201ENSMUST00000158314 306 ntBASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 Gm6736-201ENSMUST00000166583 948 ntBASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 Gm37935-201ENSMUST00000192012 982 ntBASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ptchd3Q0EEE2 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ptchd3Q0EEE2 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ptchd3Q0EEE2 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ptchd3Q0EEE2 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ptchd3Q0EEE2 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ptchd3Q0EEE2 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ptchd3Q0EEE2 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ptchd3Q0EEE2 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ptchd3Q0EEE2 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ptchd3Q0EEE2 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ptchd3Q0EEE2 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.16□□□□□ -0.3
Ptchd3Q0EEE2 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ptchd3Q0EEE2 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.16□□□□□ -0.3
Ptchd3Q0EEE2 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ptchd3Q0EEE2 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ptchd3Q0EEE2 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ptchd3Q0EEE2 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ptchd3Q0EEE2 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.16□□□□□ -0.3
Ptchd3Q0EEE2 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.16□□□□□ -0.3
Ptchd3Q0EEE2 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.16□□□□□ -0.3
Ptchd3Q0EEE2 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.16□□□□□ -0.3
Ptchd3Q0EEE2 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.16□□□□□ -0.3
Ptchd3Q0EEE2 Chchd1-203ENSMUST00000224633 557 ntBASIC13.16□□□□□ -0.3
Ptchd3Q0EEE2 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.16□□□□□ -0.3
Ptchd3Q0EEE2 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ptchd3Q0EEE2 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ptchd3Q0EEE2 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ptchd3Q0EEE2 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ptchd3Q0EEE2 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ptchd3Q0EEE2 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ptchd3Q0EEE2 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ptchd3Q0EEE2 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms