Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.08□□□□□ -0.48
Chd8Q09XV5 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Chd8Q09XV5 Gm13549-201ENSMUST00000118339 796 ntBASIC12.08□□□□□ -0.48
Chd8Q09XV5 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chd8Q09XV5 Gm8738-201ENSMUST00000172606 329 ntBASIC12.08□□□□□ -0.48
Chd8Q09XV5 Gm37246-201ENSMUST00000192665 835 ntBASIC12.08□□□□□ -0.48
Chd8Q09XV5 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC12.08□□□□□ -0.48
Chd8Q09XV5 Gm7959-201ENSMUST00000221823 1078 ntBASIC12.08□□□□□ -0.48
Chd8Q09XV5 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chd8Q09XV5 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Chd8Q09XV5 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Chd8Q09XV5 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC12.08□□□□□ -0.48
Chd8Q09XV5 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Chd8Q09XV5 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chd8Q09XV5 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.08□□□□□ -0.48
Chd8Q09XV5 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
Chd8Q09XV5 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chd8Q09XV5 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.08□□□□□ -0.48
Chd8Q09XV5 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chd8Q09XV5 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chd8Q09XV5 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chd8Q09XV5 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Chd8Q09XV5 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.08□□□□□ -0.48
Chd8Q09XV5 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chd8Q09XV5 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chd8Q09XV5 Gm2546-201ENSMUST00000182630 991 ntBASIC12.08□□□□□ -0.48
Chd8Q09XV5 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.08□□□□□ -0.48
Chd8Q09XV5 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chd8Q09XV5 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chd8Q09XV5 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Chd8Q09XV5 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chd8Q09XV5 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chd8Q09XV5 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chd8Q09XV5 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chd8Q09XV5 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.08□□□□□ -0.48
Chd8Q09XV5 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd8Q09XV5 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd8Q09XV5 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd8Q09XV5 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd8Q09XV5 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chd8Q09XV5 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd8Q09XV5 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd8Q09XV5 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.07□□□□□ -0.48
Chd8Q09XV5 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Chd8Q09XV5 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd8Q09XV5 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC12.07□□□□□ -0.48
Chd8Q09XV5 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Chd8Q09XV5 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.07□□□□□ -0.48
Chd8Q09XV5 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Chd8Q09XV5 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd8Q09XV5 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd8Q09XV5 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd8Q09XV5 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chd8Q09XV5 Gm6170-201ENSMUST00000187672 1388 ntBASIC12.07□□□□□ -0.48
Chd8Q09XV5 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd8Q09XV5 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chd8Q09XV5 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd8Q09XV5 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Chd8Q09XV5 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Chd8Q09XV5 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd8Q09XV5 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd8Q09XV5 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Chd8Q09XV5 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd8Q09XV5 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd8Q09XV5 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd8Q09XV5 Gm11451-201ENSMUST00000118946 630 ntBASIC12.07□□□□□ -0.48
Chd8Q09XV5 Gm12943-201ENSMUST00000119616 210 ntBASIC12.07□□□□□ -0.48
Chd8Q09XV5 Gm17208-201ENSMUST00000168388 535 ntBASIC12.07□□□□□ -0.48
Chd8Q09XV5 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chd8Q09XV5 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Chd8Q09XV5 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.07□□□□□ -0.48
Chd8Q09XV5 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Chd8Q09XV5 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.07□□□□□ -0.48
Chd8Q09XV5 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC12.07□□□□□ -0.48
Chd8Q09XV5 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Chd8Q09XV5 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd8Q09XV5 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd8Q09XV5 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Chd8Q09XV5 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.07□□□□□ -0.48
Chd8Q09XV5 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd8Q09XV5 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.07□□□□□ -0.48
Chd8Q09XV5 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd8Q09XV5 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chd8Q09XV5 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chd8Q09XV5 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Chd8Q09XV5 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chd8Q09XV5 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chd8Q09XV5 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC12.06□□□□□ -0.48
Chd8Q09XV5 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chd8Q09XV5 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Chd8Q09XV5 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chd8Q09XV5 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Chd8Q09XV5 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chd8Q09XV5 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chd8Q09XV5 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Chd8Q09XV5 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chd8Q09XV5 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chd8Q09XV5 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Chd8Q09XV5 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.06□□□□□ -0.48
Chd8Q09XV5 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms