Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Mir1247-201ENSMUST00000116706 82 ntBASIC13.82□□□□□ -0.2
Ebf1Q07802 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.82□□□□□ -0.2
Ebf1Q07802 Gm15376-201ENSMUST00000122258 783 ntBASIC13.82□□□□□ -0.2
Ebf1Q07802 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf1Q07802 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.82□□□□□ -0.2
Ebf1Q07802 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Ebf1Q07802 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.82□□□□□ -0.2
Ebf1Q07802 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf1Q07802 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf1Q07802 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf1Q07802 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.82□□□□□ -0.2
Ebf1Q07802 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf1Q07802 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ebf1Q07802 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf1Q07802 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf1Q07802 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf1Q07802 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.82□□□□□ -0.2
Ebf1Q07802 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ebf1Q07802 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf1Q07802 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.82□□□□□ -0.2
Ebf1Q07802 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ebf1Q07802 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ebf1Q07802 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ebf1Q07802 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ebf1Q07802 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ebf1Q07802 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ebf1Q07802 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ebf1Q07802 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ebf1Q07802 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.81□□□□□ -0.2
Ebf1Q07802 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.81□□□□□ -0.2
Ebf1Q07802 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ebf1Q07802 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.81□□□□□ -0.2
Ebf1Q07802 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ebf1Q07802 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ebf1Q07802 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ebf1Q07802 Gm15371-201ENSMUST00000117057 784 ntBASIC13.81□□□□□ -0.2
Ebf1Q07802 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.81□□□□□ -0.2
Ebf1Q07802 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.81□□□□□ -0.2
Ebf1Q07802 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.81□□□□□ -0.2
Ebf1Q07802 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.81□□□□□ -0.2
Ebf1Q07802 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.81□□□□□ -0.2
Ebf1Q07802 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ebf1Q07802 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ebf1Q07802 Gm8927-201ENSMUST00000181978 981 ntBASIC13.81□□□□□ -0.2
Ebf1Q07802 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.81□□□□□ -0.2
Ebf1Q07802 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.81□□□□□ -0.2
Ebf1Q07802 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.81□□□□□ -0.2
Ebf1Q07802 Gm6983-201ENSMUST00000214912 628 ntBASIC13.81□□□□□ -0.2
Ebf1Q07802 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.81□□□□□ -0.2
Ebf1Q07802 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ebf1Q07802 Gm3222-201ENSMUST00000071282 990 ntBASIC13.81□□□□□ -0.2
Ebf1Q07802 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ebf1Q07802 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ebf1Q07802 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.81□□□□□ -0.2
Ebf1Q07802 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ebf1Q07802 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ebf1Q07802 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ebf1Q07802 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ebf1Q07802 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ebf1Q07802 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ebf1Q07802 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ebf1Q07802 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ebf1Q07802 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.81□□□□□ -0.2
Ebf1Q07802 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ebf1Q07802 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ebf1Q07802 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ebf1Q07802 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ebf1Q07802 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf1Q07802 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.8□□□□□ -0.2
Ebf1Q07802 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf1Q07802 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf1Q07802 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf1Q07802 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf1Q07802 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf1Q07802 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf1Q07802 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf1Q07802 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.8□□□□□ -0.2
Ebf1Q07802 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.8□□□□□ -0.2
Ebf1Q07802 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf1Q07802 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf1Q07802 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf1Q07802 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf1Q07802 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf1Q07802 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf1Q07802 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf1Q07802 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf1Q07802 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.8□□□□□ -0.2
Ebf1Q07802 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.8□□□□□ -0.2
Ebf1Q07802 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Ebf1Q07802 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf1Q07802 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.8□□□□□ -0.2
Ebf1Q07802 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
Ebf1Q07802 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf1Q07802 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.8□□□□□ -0.2
Ebf1Q07802 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.8□□□□□ -0.2
Ebf1Q07802 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf1Q07802 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf1Q07802 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf1Q07802 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf1Q07802 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms