Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Cdx4Q07424 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Cdx4Q07424 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Cdx4Q07424 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdx4Q07424 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC10.56□□□□□ -0.72
Cdx4Q07424 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cdx4Q07424 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC10.56□□□□□ -0.72
Cdx4Q07424 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC10.56□□□□□ -0.72
Cdx4Q07424 Ighv8-14-201ENSMUST00000196781 358 ntBASIC10.56□□□□□ -0.72
Cdx4Q07424 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdx4Q07424 Gm44855-201ENSMUST00000205725 362 ntBASIC10.56□□□□□ -0.72
Cdx4Q07424 AC124732.1-201ENSMUST00000221551 910 ntBASIC10.56□□□□□ -0.72
Cdx4Q07424 Gm9229-201ENSMUST00000222777 126 ntBASIC10.56□□□□□ -0.72
Cdx4Q07424 AC149588.3-201ENSMUST00000227515 150 ntBASIC10.56□□□□□ -0.72
Cdx4Q07424 AC156016.3-201ENSMUST00000228623 344 ntBASIC10.56□□□□□ -0.72
Cdx4Q07424 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Cdx4Q07424 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdx4Q07424 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdx4Q07424 Gm2423-201ENSMUST00000074863 733 ntBASIC10.56□□□□□ -0.72
Cdx4Q07424 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC10.56□□□□□ -0.72
Cdx4Q07424 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdx4Q07424 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Cdx4Q07424 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdx4Q07424 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdx4Q07424 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdx4Q07424 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdx4Q07424 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdx4Q07424 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Cdx4Q07424 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdx4Q07424 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdx4Q07424 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdx4Q07424 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdx4Q07424 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdx4Q07424 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdx4Q07424 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdx4Q07424 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Cdx4Q07424 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Cdx4Q07424 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Cdx4Q07424 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx4Q07424 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx4Q07424 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx4Q07424 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Cdx4Q07424 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Cdx4Q07424 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx4Q07424 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx4Q07424 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx4Q07424 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx4Q07424 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx4Q07424 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx4Q07424 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx4Q07424 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC10.55□□□□□ -0.72
Cdx4Q07424 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx4Q07424 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx4Q07424 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx4Q07424 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx4Q07424 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC10.55□□□□□ -0.72
Cdx4Q07424 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC10.55□□□□□ -0.72
Cdx4Q07424 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx4Q07424 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx4Q07424 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx4Q07424 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC10.55□□□□□ -0.72
Cdx4Q07424 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC10.55□□□□□ -0.72
Cdx4Q07424 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC10.55□□□□□ -0.72
Cdx4Q07424 Gtpbp10-211ENSMUST00000198799 648 ntBASIC10.55□□□□□ -0.72
Cdx4Q07424 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx4Q07424 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Cdx4Q07424 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Cdx4Q07424 AC135669.1-201ENSMUST00000213585 412 ntBASIC10.55□□□□□ -0.72
Cdx4Q07424 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx4Q07424 AC121804.3-201ENSMUST00000223420 295 ntBASIC10.55□□□□□ -0.72
Cdx4Q07424 AC140375.2-201ENSMUST00000225283 584 ntBASIC10.55□□□□□ -0.72
Cdx4Q07424 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx4Q07424 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx4Q07424 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx4Q07424 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx4Q07424 Gm20445-201ENSMUST00000061905 565 ntBASIC10.55□□□□□ -0.72
Cdx4Q07424 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx4Q07424 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Cdx4Q07424 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Cdx4Q07424 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx4Q07424 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx4Q07424 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx4Q07424 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx4Q07424 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx4Q07424 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Cdx4Q07424 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx4Q07424 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx4Q07424 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
Cdx4Q07424 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx4Q07424 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx4Q07424 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx4Q07424 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx4Q07424 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Cdx4Q07424 Gm6198-201ENSMUST00000191337 2929 ntBASIC10.54□□□□□ -0.72
Cdx4Q07424 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx4Q07424 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
Cdx4Q07424 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx4Q07424 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx4Q07424 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx4Q07424 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms