Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Gm27989-201ENSMUST00000184721 107 ntBASIC13.86□□□□□ -0.19
Gabpb1Q00420 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Gabpb1Q00420 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gabpb1Q00420 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Gabpb1Q00420 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Gabpb1Q00420 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gabpb1Q00420 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gabpb1Q00420 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gabpb1Q00420 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gabpb1Q00420 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gabpb1Q00420 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gabpb1Q00420 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gabpb1Q00420 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Gabpb1Q00420 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Gabpb1Q00420 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Gabpb1Q00420 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Gabpb1Q00420 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Gabpb1Q00420 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gabpb1Q00420 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Gabpb1Q00420 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Gabpb1Q00420 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gabpb1Q00420 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Gabpb1Q00420 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Gabpb1Q00420 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gabpb1Q00420 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gabpb1Q00420 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gabpb1Q00420 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gabpb1Q00420 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.85□□□□□ -0.19
Gabpb1Q00420 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.85□□□□□ -0.19
Gabpb1Q00420 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Gabpb1Q00420 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Gabpb1Q00420 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.85□□□□□ -0.19
Gabpb1Q00420 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.85□□□□□ -0.19
Gabpb1Q00420 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Gabpb1Q00420 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.85□□□□□ -0.19
Gabpb1Q00420 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Gabpb1Q00420 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.85□□□□□ -0.19
Gabpb1Q00420 Gm17795-201ENSMUST00000214505 757 ntBASIC13.85□□□□□ -0.19
Gabpb1Q00420 Gm18041-201ENSMUST00000218210 618 ntBASIC13.85□□□□□ -0.19
Gabpb1Q00420 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.85□□□□□ -0.19
Gabpb1Q00420 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gabpb1Q00420 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gabpb1Q00420 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Gabpb1Q00420 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gabpb1Q00420 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gabpb1Q00420 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Gabpb1Q00420 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gabpb1Q00420 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gabpb1Q00420 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Gabpb1Q00420 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gabpb1Q00420 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gabpb1Q00420 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Gabpb1Q00420 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gabpb1Q00420 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gabpb1Q00420 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gabpb1Q00420 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gabpb1Q00420 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Gabpb1Q00420 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.84□□□□□ -0.19
Gabpb1Q00420 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gabpb1Q00420 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Gabpb1Q00420 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gabpb1Q00420 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gabpb1Q00420 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Gabpb1Q00420 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gabpb1Q00420 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Gabpb1Q00420 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.84□□□□□ -0.19
Gabpb1Q00420 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.84□□□□□ -0.19
Gabpb1Q00420 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gabpb1Q00420 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.84□□□□□ -0.19
Gabpb1Q00420 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Gabpb1Q00420 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Gabpb1Q00420 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Gabpb1Q00420 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gabpb1Q00420 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Gabpb1Q00420 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Gabpb1Q00420 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gabpb1Q00420 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Gabpb1Q00420 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Gabpb1Q00420 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gabpb1Q00420 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Gabpb1Q00420 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.84□□□□□ -0.19
Gabpb1Q00420 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Gabpb1Q00420 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gabpb1Q00420 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gabpb1Q00420 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.84□□□□□ -0.19
Gabpb1Q00420 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gabpb1Q00420 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gabpb1Q00420 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Gabpb1Q00420 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.84□□□□□ -0.19
Gabpb1Q00420 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gabpb1Q00420 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gabpb1Q00420 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gabpb1Q00420 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Gabpb1Q00420 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Gabpb1Q00420 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.83□□□□□ -0.19
Gabpb1Q00420 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.19
Gabpb1Q00420 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Gabpb1Q00420 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Gabpb1Q00420 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Gabpb1Q00420 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.83□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms