Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC11.69□□□□□ -0.54
Smn1P97801 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smn1P97801 AA619741-201ENSMUST00000195095 646 ntBASIC11.69□□□□□ -0.54
Smn1P97801 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smn1P97801 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smn1P97801 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Smn1P97801 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smn1P97801 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Smn1P97801 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Smn1P97801 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smn1P97801 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smn1P97801 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smn1P97801 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smn1P97801 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smn1P97801 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Smn1P97801 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smn1P97801 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smn1P97801 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.69□□□□□ -0.54
Smn1P97801 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smn1P97801 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smn1P97801 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smn1P97801 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.69□□□□□ -0.54
Smn1P97801 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smn1P97801 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Smn1P97801 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.69□□□□□ -0.54
Smn1P97801 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smn1P97801 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smn1P97801 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smn1P97801 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smn1P97801 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smn1P97801 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smn1P97801 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.68□□□□□ -0.54
Smn1P97801 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC11.68□□□□□ -0.54
Smn1P97801 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smn1P97801 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smn1P97801 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smn1P97801 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Smn1P97801 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smn1P97801 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Smn1P97801 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smn1P97801 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smn1P97801 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Smn1P97801 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smn1P97801 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Smn1P97801 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC11.68□□□□□ -0.54
Smn1P97801 Gm12260-201ENSMUST00000122447 411 ntBASIC11.68□□□□□ -0.54
Smn1P97801 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smn1P97801 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC11.68□□□□□ -0.54
Smn1P97801 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smn1P97801 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC11.68□□□□□ -0.54
Smn1P97801 Gm18057-201ENSMUST00000208220 503 ntBASIC11.68□□□□□ -0.54
Smn1P97801 Gm5364-201ENSMUST00000216789 889 ntBASIC11.68□□□□□ -0.54
Smn1P97801 Bloc1s5-203ENSMUST00000224902 612 ntBASIC11.68□□□□□ -0.54
Smn1P97801 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Smn1P97801 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smn1P97801 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smn1P97801 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Smn1P97801 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smn1P97801 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smn1P97801 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smn1P97801 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC11.68□□□□□ -0.54
Smn1P97801 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.68□□□□□ -0.54
Smn1P97801 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smn1P97801 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Smn1P97801 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.68□□□□□ -0.54
Smn1P97801 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Smn1P97801 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smn1P97801 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smn1P97801 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smn1P97801 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smn1P97801 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Smn1P97801 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Smn1P97801 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smn1P97801 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smn1P97801 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smn1P97801 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smn1P97801 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Smn1P97801 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smn1P97801 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smn1P97801 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smn1P97801 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC11.67□□□□□ -0.54
Smn1P97801 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smn1P97801 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.67□□□□□ -0.54
Smn1P97801 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.67□□□□□ -0.54
Smn1P97801 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC11.67□□□□□ -0.54
Smn1P97801 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC11.67□□□□□ -0.54
Smn1P97801 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC11.67□□□□□ -0.54
Smn1P97801 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smn1P97801 Mir3113-201ENSMUST00000175478 76 ntBASIC11.67□□□□□ -0.54
Smn1P97801 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC11.67□□□□□ -0.54
Smn1P97801 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC11.67□□□□□ -0.54
Smn1P97801 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.67□□□□□ -0.54
Smn1P97801 Gm37714-201ENSMUST00000194742 342 ntBASIC11.67□□□□□ -0.54
Smn1P97801 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smn1P97801 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC11.67□□□□□ -0.54
Smn1P97801 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC11.67□□□□□ -0.54
Smn1P97801 AC149294.4-201ENSMUST00000227870 882 ntBASIC11.67□□□□□ -0.54
Smn1P97801 Mzt1-203ENSMUST00000227948 952 ntBASIC11.67□□□□□ -0.54
Smn1P97801 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.67□□□□□ -0.54
Smn1P97801 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms