Protein–RNA interactions for Protein: P97785

Gfra1, GDNF family receptor alpha-1, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra1P97785 Gm42471-201ENSMUST00000201457 1865 ntBASIC11.29□□□□□ -0.6
Gfra1P97785 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Gfra1P97785 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gfra1P97785 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gfra1P97785 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Gfra1P97785 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gfra1P97785 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Gfra1P97785 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Gfra1P97785 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC11.29□□□□□ -0.6
Gfra1P97785 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.29□□□□□ -0.6
Gfra1P97785 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gfra1P97785 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Gfra1P97785 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Gfra1P97785 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gfra1P97785 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gfra1P97785 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gfra1P97785 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Gfra1P97785 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gfra1P97785 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Gfra1P97785 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Gfra1P97785 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gfra1P97785 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gfra1P97785 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Gfra1P97785 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Gfra1P97785 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gfra1P97785 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Gfra1P97785 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gfra1P97785 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Gfra1P97785 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Gfra1P97785 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Gfra1P97785 Gm15806-201ENSMUST00000120696 955 ntBASIC11.28□□□□□ -0.6
Gfra1P97785 Gm28911-201ENSMUST00000188837 117 ntBASIC11.28□□□□□ -0.6
Gfra1P97785 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.28□□□□□ -0.6
Gfra1P97785 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC11.28□□□□□ -0.6
Gfra1P97785 Gm43094-201ENSMUST00000196549 921 ntBASIC11.28□□□□□ -0.6
Gfra1P97785 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Gfra1P97785 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.28□□□□□ -0.6
Gfra1P97785 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.28□□□□□ -0.6
Gfra1P97785 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Gfra1P97785 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.28□□□□□ -0.6
Gfra1P97785 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gfra1P97785 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gfra1P97785 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gfra1P97785 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.28□□□□□ -0.6
Gfra1P97785 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gfra1P97785 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gfra1P97785 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Gfra1P97785 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Gfra1P97785 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gfra1P97785 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.28□□□□□ -0.6
Gfra1P97785 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Gfra1P97785 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Gfra1P97785 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gfra1P97785 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gfra1P97785 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gfra1P97785 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Gfra1P97785 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gfra1P97785 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.27□□□□□ -0.6
Gfra1P97785 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Gfra1P97785 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Gfra1P97785 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Gfra1P97785 Rubie-203ENSMUST00000227803 2430 ntBASIC11.27□□□□□ -0.6
Gfra1P97785 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Gfra1P97785 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gfra1P97785 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gfra1P97785 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gfra1P97785 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gfra1P97785 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.27□□□□□ -0.61
Gfra1P97785 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.27□□□□□ -0.61
Gfra1P97785 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gfra1P97785 Gm15371-201ENSMUST00000117057 784 ntBASIC11.27□□□□□ -0.61
Gfra1P97785 Gm12485-201ENSMUST00000119641 291 ntBASIC11.27□□□□□ -0.61
Gfra1P97785 Gm12138-201ENSMUST00000122180 951 ntBASIC11.27□□□□□ -0.61
Gfra1P97785 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.27□□□□□ -0.61
Gfra1P97785 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.27□□□□□ -0.61
Gfra1P97785 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gfra1P97785 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gfra1P97785 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.27□□□□□ -0.61
Gfra1P97785 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.27□□□□□ -0.61
Gfra1P97785 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.27□□□□□ -0.61
Gfra1P97785 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gfra1P97785 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gfra1P97785 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gfra1P97785 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gfra1P97785 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gfra1P97785 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gfra1P97785 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gfra1P97785 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gfra1P97785 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Gfra1P97785 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gfra1P97785 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC11.27□□□□□ -0.61
Gfra1P97785 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gfra1P97785 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gfra1P97785 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gfra1P97785 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gfra1P97785 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gfra1P97785 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gfra1P97785 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gfra1P97785 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gfra1P97785 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms