Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cacna1aP97445 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cacna1aP97445 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Cacna1aP97445 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cacna1aP97445 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cacna1aP97445 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cacna1aP97445 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.58□□□□□ -0.4
Cacna1aP97445 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cacna1aP97445 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cacna1aP97445 Gm6023-201ENSMUST00000118217 606 ntBASIC12.58□□□□□ -0.4
Cacna1aP97445 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Cacna1aP97445 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cacna1aP97445 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cacna1aP97445 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.58□□□□□ -0.4
Cacna1aP97445 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cacna1aP97445 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cacna1aP97445 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.58□□□□□ -0.4
Cacna1aP97445 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cacna1aP97445 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cacna1aP97445 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cacna1aP97445 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Cacna1aP97445 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cacna1aP97445 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Cacna1aP97445 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cacna1aP97445 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cacna1aP97445 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cacna1aP97445 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Cacna1aP97445 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cacna1aP97445 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cacna1aP97445 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cacna1aP97445 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cacna1aP97445 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cacna1aP97445 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cacna1aP97445 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cacna1aP97445 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cacna1aP97445 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cacna1aP97445 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.57□□□□□ -0.4
Cacna1aP97445 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
Cacna1aP97445 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cacna1aP97445 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cacna1aP97445 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cacna1aP97445 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cacna1aP97445 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Cacna1aP97445 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cacna1aP97445 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.57□□□□□ -0.4
Cacna1aP97445 Gm17376-201ENSMUST00000166016 84 ntBASIC12.57□□□□□ -0.4
Cacna1aP97445 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.57□□□□□ -0.4
Cacna1aP97445 Gm29608-201ENSMUST00000190444 463 ntBASIC12.57□□□□□ -0.4
Cacna1aP97445 Gm29741-201ENSMUST00000192667 421 ntBASIC12.57□□□□□ -0.4
Cacna1aP97445 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cacna1aP97445 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cacna1aP97445 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cacna1aP97445 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cacna1aP97445 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cacna1aP97445 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cacna1aP97445 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cacna1aP97445 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cacna1aP97445 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.57□□□□□ -0.4
Cacna1aP97445 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cacna1aP97445 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.57□□□□□ -0.4
Cacna1aP97445 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cacna1aP97445 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cacna1aP97445 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cacna1aP97445 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cacna1aP97445 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cacna1aP97445 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cacna1aP97445 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cacna1aP97445 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cacna1aP97445 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cacna1aP97445 Mir5120-201ENSMUST00000175020 78 ntBASIC12.57□□□□□ -0.4
Cacna1aP97445 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
Cacna1aP97445 Olfr284-202ENSMUST00000206647 966 ntBASIC12.57□□□□□ -0.4
Cacna1aP97445 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cacna1aP97445 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Cacna1aP97445 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cacna1aP97445 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cacna1aP97445 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cacna1aP97445 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cacna1aP97445 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cacna1aP97445 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cacna1aP97445 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cacna1aP97445 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cacna1aP97445 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cacna1aP97445 Acot6-202ENSMUST00000222921 3622 ntBASIC12.56□□□□□ -0.4
Cacna1aP97445 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cacna1aP97445 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cacna1aP97445 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cacna1aP97445 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cacna1aP97445 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cacna1aP97445 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cacna1aP97445 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cacna1aP97445 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cacna1aP97445 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cacna1aP97445 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cacna1aP97445 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cacna1aP97445 Gm5523-201ENSMUST00000180415 997 ntBASIC12.56□□□□□ -0.4
Cacna1aP97445 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cacna1aP97445 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cacna1aP97445 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cacna1aP97445 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms