Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shox2P70390 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.47□□□□□ -0.25
Shox2P70390 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shox2P70390 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shox2P70390 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.47□□□□□ -0.25
Shox2P70390 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.47□□□□□ -0.25
Shox2P70390 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Shox2P70390 Thap2-203ENSMUST00000218989 527 ntBASIC13.47□□□□□ -0.25
Shox2P70390 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.47□□□□□ -0.25
Shox2P70390 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shox2P70390 Gm7461-201ENSMUST00000058918 827 ntBASIC13.47□□□□□ -0.25
Shox2P70390 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Shox2P70390 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Shox2P70390 BC001981-202ENSMUST00000191393 1545 ntBASIC13.47□□□□□ -0.25
Shox2P70390 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shox2P70390 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Shox2P70390 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shox2P70390 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shox2P70390 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shox2P70390 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shox2P70390 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shox2P70390 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Shox2P70390 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shox2P70390 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shox2P70390 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shox2P70390 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shox2P70390 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shox2P70390 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shox2P70390 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shox2P70390 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shox2P70390 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shox2P70390 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shox2P70390 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shox2P70390 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shox2P70390 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shox2P70390 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.46□□□□□ -0.25
Shox2P70390 Gm6443-201ENSMUST00000203599 874 ntBASIC13.46□□□□□ -0.25
Shox2P70390 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.46□□□□□ -0.25
Shox2P70390 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.46□□□□□ -0.25
Shox2P70390 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.46□□□□□ -0.25
Shox2P70390 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shox2P70390 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shox2P70390 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Shox2P70390 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shox2P70390 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shox2P70390 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shox2P70390 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.46□□□□□ -0.25
Shox2P70390 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Shox2P70390 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Shox2P70390 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
Shox2P70390 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Shox2P70390 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Shox2P70390 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Shox2P70390 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Shox2P70390 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Shox2P70390 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shox2P70390 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shox2P70390 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shox2P70390 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Shox2P70390 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shox2P70390 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shox2P70390 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Shox2P70390 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shox2P70390 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shox2P70390 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shox2P70390 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shox2P70390 Mir874-201ENSMUST00000104769 76 ntBASIC13.45□□□□□ -0.26
Shox2P70390 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Shox2P70390 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Shox2P70390 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Shox2P70390 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.45□□□□□ -0.26
Shox2P70390 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Shox2P70390 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Shox2P70390 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Shox2P70390 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Shox2P70390 Gm21362-201ENSMUST00000194272 928 ntBASIC13.45□□□□□ -0.26
Shox2P70390 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Shox2P70390 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Shox2P70390 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.45□□□□□ -0.26
Shox2P70390 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Shox2P70390 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shox2P70390 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shox2P70390 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shox2P70390 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Shox2P70390 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Shox2P70390 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shox2P70390 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Shox2P70390 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.45□□□□□ -0.26
Shox2P70390 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.45□□□□□ -0.26
Shox2P70390 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shox2P70390 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.45□□□□□ -0.26
Shox2P70390 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shox2P70390 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shox2P70390 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shox2P70390 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shox2P70390 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shox2P70390 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Shox2P70390 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.44□□□□□ -0.26
Shox2P70390 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Shox2P70390 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms