Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Msx3P70354 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Msx3P70354 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Msx3P70354 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Msx3P70354 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Msx3P70354 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Msx3P70354 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.03□□□□□ -0.16
Msx3P70354 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Msx3P70354 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Msx3P70354 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Msx3P70354 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Msx3P70354 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Msx3P70354 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.03□□□□□ -0.16
Msx3P70354 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Msx3P70354 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Msx3P70354 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Msx3P70354 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Msx3P70354 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Msx3P70354 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Msx3P70354 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Msx3P70354 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Msx3P70354 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Msx3P70354 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.02□□□□□ -0.16
Msx3P70354 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Msx3P70354 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Msx3P70354 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Msx3P70354 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Msx3P70354 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Msx3P70354 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Msx3P70354 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Msx3P70354 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Msx3P70354 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Msx3P70354 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Msx3P70354 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Msx3P70354 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Msx3P70354 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Msx3P70354 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.02□□□□□ -0.16
Msx3P70354 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Msx3P70354 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Msx3P70354 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.02□□□□□ -0.16
Msx3P70354 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.02□□□□□ -0.16
Msx3P70354 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Msx3P70354 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.02□□□□□ -0.17
Msx3P70354 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Msx3P70354 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.02□□□□□ -0.17
Msx3P70354 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.02□□□□□ -0.17
Msx3P70354 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.02□□□□□ -0.17
Msx3P70354 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.02□□□□□ -0.17
Msx3P70354 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.02□□□□□ -0.17
Msx3P70354 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.02□□□□□ -0.17
Msx3P70354 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.02□□□□□ -0.17
Msx3P70354 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Msx3P70354 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Msx3P70354 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Msx3P70354 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.02□□□□□ -0.17
Msx3P70354 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Msx3P70354 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.02□□□□□ -0.17
Msx3P70354 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Msx3P70354 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Msx3P70354 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
Msx3P70354 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.02□□□□□ -0.17
Msx3P70354 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Msx3P70354 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Msx3P70354 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Msx3P70354 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Msx3P70354 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Msx3P70354 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Msx3P70354 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Msx3P70354 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Msx3P70354 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.01□□□□□ -0.17
Msx3P70354 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Msx3P70354 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Msx3P70354 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.01□□□□□ -0.17
Msx3P70354 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Msx3P70354 Gm27306-201ENSMUST00000183970 107 ntBASIC14.01□□□□□ -0.17
Msx3P70354 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.01□□□□□ -0.17
Msx3P70354 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Msx3P70354 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Msx3P70354 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.01□□□□□ -0.17
Msx3P70354 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Msx3P70354 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.01□□□□□ -0.17
Msx3P70354 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Msx3P70354 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Msx3P70354 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Msx3P70354 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Msx3P70354 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Msx3P70354 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Msx3P70354 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.01□□□□□ -0.17
Msx3P70354 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Msx3P70354 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Msx3P70354 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Msx3P70354 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Msx3P70354 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Msx3P70354 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14□□□□□ -0.17
Msx3P70354 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14□□□□□ -0.17
Msx3P70354 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14□□□□□ -0.17
Msx3P70354 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Msx3P70354 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Msx3P70354 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14□□□□□ -0.17
Msx3P70354 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms