Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smad1P70340 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smad1P70340 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smad1P70340 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.09□□□□□ -0.15
Smad1P70340 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.09□□□□□ -0.15
Smad1P70340 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smad1P70340 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smad1P70340 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Smad1P70340 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smad1P70340 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smad1P70340 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Smad1P70340 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.08□□□□□ -0.16
Smad1P70340 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smad1P70340 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smad1P70340 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.08□□□□□ -0.16
Smad1P70340 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smad1P70340 Gm6912-201ENSMUST00000117218 544 ntBASIC14.08□□□□□ -0.16
Smad1P70340 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
Smad1P70340 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.08□□□□□ -0.16
Smad1P70340 Gm27631-201ENSMUST00000184163 466 ntBASIC14.08□□□□□ -0.16
Smad1P70340 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smad1P70340 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.08□□□□□ -0.16
Smad1P70340 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smad1P70340 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.08□□□□□ -0.16
Smad1P70340 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smad1P70340 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.08□□□□□ -0.16
Smad1P70340 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smad1P70340 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smad1P70340 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smad1P70340 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smad1P70340 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smad1P70340 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smad1P70340 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smad1P70340 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smad1P70340 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smad1P70340 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Smad1P70340 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smad1P70340 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smad1P70340 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Smad1P70340 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smad1P70340 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smad1P70340 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smad1P70340 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smad1P70340 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smad1P70340 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smad1P70340 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smad1P70340 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.07□□□□□ -0.16
Smad1P70340 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Smad1P70340 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.07□□□□□ -0.16
Smad1P70340 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.07□□□□□ -0.16
Smad1P70340 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smad1P70340 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.07□□□□□ -0.16
Smad1P70340 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smad1P70340 Gm6218-201ENSMUST00000219812 628 ntBASIC14.07□□□□□ -0.16
Smad1P70340 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smad1P70340 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smad1P70340 Mir125a-201ENSMUST00000083545 68 ntBASIC14.07□□□□□ -0.16
Smad1P70340 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.07□□□□□ -0.16
Smad1P70340 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smad1P70340 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smad1P70340 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smad1P70340 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Smad1P70340 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smad1P70340 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smad1P70340 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smad1P70340 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Smad1P70340 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smad1P70340 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smad1P70340 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smad1P70340 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smad1P70340 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.06□□□□□ -0.16
Smad1P70340 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smad1P70340 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.06□□□□□ -0.16
Smad1P70340 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Smad1P70340 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smad1P70340 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Smad1P70340 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Smad1P70340 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.06□□□□□ -0.16
Smad1P70340 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.06□□□□□ -0.16
Smad1P70340 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smad1P70340 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.06□□□□□ -0.16
Smad1P70340 Gm8515-201ENSMUST00000194852 576 ntBASIC14.06□□□□□ -0.16
Smad1P70340 Gm6745-201ENSMUST00000199216 526 ntBASIC14.06□□□□□ -0.16
Smad1P70340 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smad1P70340 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.06□□□□□ -0.16
Smad1P70340 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smad1P70340 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smad1P70340 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Smad1P70340 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smad1P70340 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smad1P70340 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smad1P70340 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smad1P70340 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.06□□□□□ -0.16
Smad1P70340 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Smad1P70340 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smad1P70340 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.06□□□□□ -0.16
Smad1P70340 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smad1P70340 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smad1P70340 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smad1P70340 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms