Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim4P70271 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Pdlim4P70271 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim4P70271 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim4P70271 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.38□□□□□ -0.59
Pdlim4P70271 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim4P70271 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.38□□□□□ -0.59
Pdlim4P70271 Gm9522-201ENSMUST00000182394 926 ntBASIC11.38□□□□□ -0.59
Pdlim4P70271 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.38□□□□□ -0.59
Pdlim4P70271 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim4P70271 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim4P70271 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Pdlim4P70271 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim4P70271 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim4P70271 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim4P70271 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim4P70271 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.38□□□□□ -0.59
Pdlim4P70271 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim4P70271 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim4P70271 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC11.38□□□□□ -0.59
Pdlim4P70271 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Pdlim4P70271 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim4P70271 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim4P70271 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim4P70271 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim4P70271 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim4P70271 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim4P70271 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim4P70271 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Pdlim4P70271 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim4P70271 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.37□□□□□ -0.59
Pdlim4P70271 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim4P70271 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.37□□□□□ -0.59
Pdlim4P70271 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim4P70271 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim4P70271 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim4P70271 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim4P70271 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.37□□□□□ -0.59
Pdlim4P70271 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.37□□□□□ -0.59
Pdlim4P70271 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.37□□□□□ -0.59
Pdlim4P70271 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.37□□□□□ -0.59
Pdlim4P70271 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim4P70271 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Pdlim4P70271 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Pdlim4P70271 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Pdlim4P70271 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Pdlim4P70271 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim4P70271 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim4P70271 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.37□□□□□ -0.59
Pdlim4P70271 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim4P70271 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim4P70271 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Pdlim4P70271 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim4P70271 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11.37□□□□□ -0.59
Pdlim4P70271 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Pdlim4P70271 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim4P70271 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim4P70271 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim4P70271 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim4P70271 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim4P70271 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim4P70271 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Pdlim4P70271 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.37□□□□□ -0.59
Pdlim4P70271 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim4P70271 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.37□□□□□ -0.59
Pdlim4P70271 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Pdlim4P70271 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim4P70271 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.37□□□□□ -0.59
Pdlim4P70271 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim4P70271 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.37□□□□□ -0.59
Pdlim4P70271 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim4P70271 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim4P70271 Syt7-204ENSMUST00000223586 1344 ntBASIC11.36□□□□□ -0.59
Pdlim4P70271 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim4P70271 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
Pdlim4P70271 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim4P70271 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim4P70271 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.36□□□□□ -0.59
Pdlim4P70271 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Pdlim4P70271 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim4P70271 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim4P70271 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim4P70271 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.36□□□□□ -0.59
Pdlim4P70271 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim4P70271 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim4P70271 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Pdlim4P70271 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.36□□□□□ -0.59
Pdlim4P70271 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.36□□□□□ -0.59
Pdlim4P70271 Gm24694-201ENSMUST00000180054 110 ntBASIC11.36□□□□□ -0.59
Pdlim4P70271 Gm27663-201ENSMUST00000184839 110 ntBASIC11.36□□□□□ -0.59
Pdlim4P70271 Gm29667-201ENSMUST00000190817 490 ntBASIC11.36□□□□□ -0.59
Pdlim4P70271 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.36□□□□□ -0.59
Pdlim4P70271 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC11.36□□□□□ -0.59
Pdlim4P70271 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC11.36□□□□□ -0.59
Pdlim4P70271 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.36□□□□□ -0.59
Pdlim4P70271 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim4P70271 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim4P70271 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Pdlim4P70271 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim4P70271 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms