Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Six5P70178 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Six5P70178 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Six5P70178 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Six5P70178 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.78□□□□□ -0.36
Six5P70178 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Six5P70178 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Six5P70178 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Six5P70178 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Six5P70178 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Six5P70178 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Six5P70178 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Six5P70178 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Six5P70178 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Six5P70178 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Six5P70178 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Six5P70178 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Six5P70178 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Six5P70178 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Six5P70178 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Six5P70178 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Six5P70178 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Six5P70178 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Six5P70178 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.77□□□□□ -0.36
Six5P70178 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.77□□□□□ -0.36
Six5P70178 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.77□□□□□ -0.36
Six5P70178 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Six5P70178 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Six5P70178 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Six5P70178 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Six5P70178 Gm15770-201ENSMUST00000117498 584 ntBASIC12.77□□□□□ -0.37
Six5P70178 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.77□□□□□ -0.37
Six5P70178 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.77□□□□□ -0.37
Six5P70178 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Six5P70178 Gm28760-201ENSMUST00000185995 736 ntBASIC12.77□□□□□ -0.37
Six5P70178 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Six5P70178 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.77□□□□□ -0.37
Six5P70178 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.77□□□□□ -0.37
Six5P70178 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Six5P70178 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Six5P70178 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.77□□□□□ -0.37
Six5P70178 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Six5P70178 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Six5P70178 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Six5P70178 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.77□□□□□ -0.37
Six5P70178 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Six5P70178 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Six5P70178 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Six5P70178 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Six5P70178 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Six5P70178 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Six5P70178 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Six5P70178 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Six5P70178 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Six5P70178 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Six5P70178 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.76□□□□□ -0.37
Six5P70178 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Six5P70178 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Six5P70178 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Six5P70178 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Six5P70178 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Six5P70178 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Six5P70178 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.76□□□□□ -0.37
Six5P70178 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Six5P70178 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.76□□□□□ -0.37
Six5P70178 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.76□□□□□ -0.37
Six5P70178 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Six5P70178 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Six5P70178 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Six5P70178 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Six5P70178 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Six5P70178 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Six5P70178 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.76□□□□□ -0.37
Six5P70178 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.76□□□□□ -0.37
Six5P70178 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Six5P70178 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Six5P70178 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Six5P70178 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Six5P70178 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Six5P70178 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Six5P70178 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Six5P70178 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Six5P70178 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Six5P70178 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Six5P70178 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.75□□□□□ -0.37
Six5P70178 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Six5P70178 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Six5P70178 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Six5P70178 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Six5P70178 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Six5P70178 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Six5P70178 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.75□□□□□ -0.37
Six5P70178 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.75□□□□□ -0.37
Six5P70178 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Six5P70178 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Six5P70178 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Six5P70178 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Six5P70178 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Six5P70178 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Six5P70178 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms