Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx1P63006 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx1P63006 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx1P63006 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx1P63006 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx1P63006 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx1P63006 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.38□□□□□ -0.27
Lhx1P63006 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx1P63006 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Lhx1P63006 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx1P63006 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx1P63006 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx1P63006 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx1P63006 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Lhx1P63006 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx1P63006 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx1P63006 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Lhx1P63006 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx1P63006 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx1P63006 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx1P63006 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx1P63006 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx1P63006 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx1P63006 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx1P63006 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx1P63006 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Lhx1P63006 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Lhx1P63006 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx1P63006 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx1P63006 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx1P63006 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx1P63006 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Lhx1P63006 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx1P63006 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.37□□□□□ -0.27
Lhx1P63006 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.37□□□□□ -0.27
Lhx1P63006 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.37□□□□□ -0.27
Lhx1P63006 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.37□□□□□ -0.27
Lhx1P63006 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.37□□□□□ -0.27
Lhx1P63006 Gm12403-201ENSMUST00000121384 959 ntBASIC13.37□□□□□ -0.27
Lhx1P63006 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Lhx1P63006 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.37□□□□□ -0.27
Lhx1P63006 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.37□□□□□ -0.27
Lhx1P63006 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.37□□□□□ -0.27
Lhx1P63006 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.37□□□□□ -0.27
Lhx1P63006 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.37□□□□□ -0.27
Lhx1P63006 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx1P63006 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.37□□□□□ -0.27
Lhx1P63006 Gm5035-201ENSMUST00000215581 927 ntBASIC13.37□□□□□ -0.27
Lhx1P63006 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.37□□□□□ -0.27
Lhx1P63006 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.37□□□□□ -0.27
Lhx1P63006 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx1P63006 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx1P63006 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx1P63006 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx1P63006 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.37□□□□□ -0.27
Lhx1P63006 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx1P63006 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.37□□□□□ -0.27
Lhx1P63006 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx1P63006 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx1P63006 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx1P63006 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.37□□□□□ -0.27
Lhx1P63006 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.37□□□□□ -0.27
Lhx1P63006 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Lhx1P63006 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx1P63006 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx1P63006 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.37□□□□□ -0.27
Lhx1P63006 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.37□□□□□ -0.27
Lhx1P63006 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx1P63006 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Lhx1P63006 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx1P63006 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.36□□□□□ -0.27
Lhx1P63006 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx1P63006 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx1P63006 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Lhx1P63006 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx1P63006 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx1P63006 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx1P63006 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx1P63006 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx1P63006 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx1P63006 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx1P63006 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx1P63006 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx1P63006 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx1P63006 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx1P63006 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.36□□□□□ -0.27
Lhx1P63006 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Lhx1P63006 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.36□□□□□ -0.27
Lhx1P63006 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.36□□□□□ -0.27
Lhx1P63006 Gm43433-201ENSMUST00000196573 481 ntBASIC13.36□□□□□ -0.27
Lhx1P63006 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx1P63006 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.36□□□□□ -0.27
Lhx1P63006 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.36□□□□□ -0.27
Lhx1P63006 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx1P63006 Gm18473-201ENSMUST00000220543 868 ntBASIC13.36□□□□□ -0.27
Lhx1P63006 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx1P63006 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx1P63006 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx1P63006 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx1P63006 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms