Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.94□□□□□ -0.18
Ybx1P62960 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ybx1P62960 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ybx1P62960 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ybx1P62960 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Ybx1P62960 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.94□□□□□ -0.18
Ybx1P62960 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.94□□□□□ -0.18
Ybx1P62960 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Ybx1P62960 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.94□□□□□ -0.18
Ybx1P62960 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ybx1P62960 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.94□□□□□ -0.18
Ybx1P62960 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC13.94□□□□□ -0.18
Ybx1P62960 Gm9257-201ENSMUST00000221254 232 ntBASIC13.94□□□□□ -0.18
Ybx1P62960 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ybx1P62960 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ybx1P62960 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ybx1P62960 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Ybx1P62960 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ybx1P62960 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ybx1P62960 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ybx1P62960 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ybx1P62960 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ybx1P62960 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ybx1P62960 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ybx1P62960 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ybx1P62960 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ybx1P62960 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ybx1P62960 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ybx1P62960 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ybx1P62960 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ybx1P62960 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ybx1P62960 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ybx1P62960 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ybx1P62960 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ybx1P62960 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ybx1P62960 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ybx1P62960 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ybx1P62960 Gm22018-201ENSMUST00000104357 131 ntBASIC13.93□□□□□ -0.18
Ybx1P62960 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.93□□□□□ -0.18
Ybx1P62960 Gm8213-201ENSMUST00000118191 441 ntBASIC13.93□□□□□ -0.18
Ybx1P62960 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.93□□□□□ -0.18
Ybx1P62960 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ybx1P62960 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ybx1P62960 Gm8584-201ENSMUST00000171982 758 ntBASIC13.93□□□□□ -0.18
Ybx1P62960 Gm27682-201ENSMUST00000183930 110 ntBASIC13.93□□□□□ -0.18
Ybx1P62960 Mir8109-201ENSMUST00000184375 117 ntBASIC13.93□□□□□ -0.18
Ybx1P62960 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.93□□□□□ -0.18
Ybx1P62960 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.93□□□□□ -0.18
Ybx1P62960 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.93□□□□□ -0.18
Ybx1P62960 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.93□□□□□ -0.18
Ybx1P62960 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ybx1P62960 Gm19309-201ENSMUST00000218295 205 ntBASIC13.93□□□□□ -0.18
Ybx1P62960 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ybx1P62960 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.93□□□□□ -0.18
Ybx1P62960 Itm2b-204ENSMUST00000228637 783 ntBASIC13.93□□□□□ -0.18
Ybx1P62960 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ybx1P62960 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ybx1P62960 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.93□□□□□ -0.18
Ybx1P62960 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ybx1P62960 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
Ybx1P62960 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ybx1P62960 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ybx1P62960 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ybx1P62960 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ybx1P62960 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ybx1P62960 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ybx1P62960 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ybx1P62960 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
Ybx1P62960 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.93□□□□□ -0.18
Ybx1P62960 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ybx1P62960 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ybx1P62960 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ybx1P62960 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ybx1P62960 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ybx1P62960 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.92□□□□□ -0.18
Ybx1P62960 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ybx1P62960 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ybx1P62960 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ybx1P62960 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ybx1P62960 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ybx1P62960 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ybx1P62960 Gm1335-201ENSMUST00000121653 386 ntBASIC13.92□□□□□ -0.18
Ybx1P62960 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ybx1P62960 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.92□□□□□ -0.18
Ybx1P62960 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ybx1P62960 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ybx1P62960 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.92□□□□□ -0.18
Ybx1P62960 Gm19184-201ENSMUST00000196798 928 ntBASIC13.92□□□□□ -0.18
Ybx1P62960 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.92□□□□□ -0.18
Ybx1P62960 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ybx1P62960 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ybx1P62960 Gm6013-201ENSMUST00000212264 699 ntBASIC13.92□□□□□ -0.18
Ybx1P62960 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.92□□□□□ -0.18
Ybx1P62960 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ybx1P62960 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.92□□□□□ -0.18
Ybx1P62960 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ybx1P62960 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Ybx1P62960 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ybx1P62960 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ybx1P62960 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms