Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gabra1P62812 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gabra1P62812 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gabra1P62812 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Gabra1P62812 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Gabra1P62812 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gabra1P62812 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gabra1P62812 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.47□□□□□ -0.57
Gabra1P62812 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gabra1P62812 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Gabra1P62812 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gabra1P62812 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Gabra1P62812 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gabra1P62812 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Gabra1P62812 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Gabra1P62812 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Gabra1P62812 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Gabra1P62812 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gabra1P62812 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC11.47□□□□□ -0.57
Gabra1P62812 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Gabra1P62812 Gm12882-201ENSMUST00000121696 517 ntBASIC11.47□□□□□ -0.57
Gabra1P62812 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Gabra1P62812 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC11.47□□□□□ -0.57
Gabra1P62812 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC11.47□□□□□ -0.57
Gabra1P62812 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC11.47□□□□□ -0.57
Gabra1P62812 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC11.47□□□□□ -0.57
Gabra1P62812 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC11.47□□□□□ -0.57
Gabra1P62812 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gabra1P62812 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gabra1P62812 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gabra1P62812 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gabra1P62812 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gabra1P62812 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gabra1P62812 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Gabra1P62812 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gabra1P62812 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Gabra1P62812 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Gabra1P62812 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Gabra1P62812 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gabra1P62812 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gabra1P62812 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gabra1P62812 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Gabra1P62812 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Gabra1P62812 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Gabra1P62812 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gabra1P62812 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.47□□□□□ -0.57
Gabra1P62812 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gabra1P62812 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gabra1P62812 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Gabra1P62812 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gabra1P62812 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gabra1P62812 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gabra1P62812 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gabra1P62812 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gabra1P62812 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Gabra1P62812 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.57
Gabra1P62812 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gabra1P62812 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gabra1P62812 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gabra1P62812 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Gabra1P62812 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Gabra1P62812 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gabra1P62812 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Gabra1P62812 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Gabra1P62812 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Gabra1P62812 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gabra1P62812 Gm16198-201ENSMUST00000118766 670 ntBASIC11.46□□□□□ -0.57
Gabra1P62812 Gm27300-201ENSMUST00000184085 97 ntBASIC11.46□□□□□ -0.57
Gabra1P62812 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Gabra1P62812 Gm27335-201ENSMUST00000184758 97 ntBASIC11.46□□□□□ -0.57
Gabra1P62812 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Gabra1P62812 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gabra1P62812 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC11.46□□□□□ -0.57
Gabra1P62812 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Gabra1P62812 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gabra1P62812 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Gabra1P62812 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
Gabra1P62812 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Gabra1P62812 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Gabra1P62812 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
Gabra1P62812 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Gabra1P62812 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Gabra1P62812 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Gabra1P62812 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Gabra1P62812 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Gabra1P62812 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Gabra1P62812 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Gabra1P62812 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Gabra1P62812 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Gabra1P62812 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Gabra1P62812 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Gabra1P62812 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gabra1P62812 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Gabra1P62812 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gabra1P62812 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Gabra1P62812 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gabra1P62812 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Gabra1P62812 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Gabra1P62812 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Gabra1P62812 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms