Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Lsm3P62311 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Lsm3P62311 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.41□□□□□ -0.42
Lsm3P62311 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm3P62311 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm3P62311 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Lsm3P62311 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm3P62311 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm3P62311 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm3P62311 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm3P62311 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm3P62311 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.4□□□□□ -0.42
Lsm3P62311 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm3P62311 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm3P62311 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Lsm3P62311 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm3P62311 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm3P62311 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Lsm3P62311 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm3P62311 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Lsm3P62311 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm3P62311 AA414768-201ENSMUST00000121924 1257 ntBASIC12.4□□□□□ -0.42
Lsm3P62311 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Lsm3P62311 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.4□□□□□ -0.42
Lsm3P62311 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm3P62311 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm3P62311 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.4□□□□□ -0.42
Lsm3P62311 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.4□□□□□ -0.42
Lsm3P62311 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm3P62311 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm3P62311 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm3P62311 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Lsm3P62311 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm3P62311 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm3P62311 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Lsm3P62311 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Lsm3P62311 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Lsm3P62311 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm3P62311 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm3P62311 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.39□□□□□ -0.43
Lsm3P62311 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm3P62311 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm3P62311 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm3P62311 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm3P62311 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Lsm3P62311 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm3P62311 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm3P62311 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.39□□□□□ -0.43
Lsm3P62311 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.39□□□□□ -0.43
Lsm3P62311 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm3P62311 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.39□□□□□ -0.43
Lsm3P62311 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.39□□□□□ -0.43
Lsm3P62311 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.39□□□□□ -0.43
Lsm3P62311 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm3P62311 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Lsm3P62311 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm3P62311 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm3P62311 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.39□□□□□ -0.43
Lsm3P62311 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm3P62311 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm3P62311 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm3P62311 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm3P62311 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm3P62311 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm3P62311 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm3P62311 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm3P62311 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm3P62311 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.38□□□□□ -0.43
Lsm3P62311 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm3P62311 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm3P62311 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm3P62311 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm3P62311 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Lsm3P62311 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Lsm3P62311 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.38□□□□□ -0.43
Lsm3P62311 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm3P62311 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm3P62311 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm3P62311 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm3P62311 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Lsm3P62311 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm3P62311 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm3P62311 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.38□□□□□ -0.43
Lsm3P62311 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm3P62311 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm3P62311 Gm5479-201ENSMUST00000160578 435 ntBASIC12.38□□□□□ -0.43
Lsm3P62311 Gm4899-201ENSMUST00000178708 719 ntBASIC12.38□□□□□ -0.43
Lsm3P62311 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm3P62311 Gm10231-201ENSMUST00000181584 441 ntBASIC12.38□□□□□ -0.43
Lsm3P62311 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm3P62311 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm3P62311 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.38□□□□□ -0.43
Lsm3P62311 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.38□□□□□ -0.43
Lsm3P62311 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Lsm3P62311 Gm10175-202ENSMUST00000208752 441 ntBASIC12.38□□□□□ -0.43
Lsm3P62311 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm3P62311 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm3P62311 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms