Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b6P59708 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Sf3b6P59708 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b6P59708 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Sf3b6P59708 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b6P59708 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b6P59708 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Sf3b6P59708 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b6P59708 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b6P59708 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Sf3b6P59708 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b6P59708 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Sf3b6P59708 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3b6P59708 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3b6P59708 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3b6P59708 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3b6P59708 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3b6P59708 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3b6P59708 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Sf3b6P59708 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.11□□□□□ -0.47
Sf3b6P59708 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3b6P59708 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3b6P59708 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.11□□□□□ -0.47
Sf3b6P59708 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Sf3b6P59708 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.11□□□□□ -0.47
Sf3b6P59708 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3b6P59708 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.11□□□□□ -0.47
Sf3b6P59708 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3b6P59708 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3b6P59708 Gm27494-201ENSMUST00000184735 189 ntBASIC12.11□□□□□ -0.47
Sf3b6P59708 Gm43575-201ENSMUST00000196420 516 ntBASIC12.11□□□□□ -0.47
Sf3b6P59708 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3b6P59708 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Sf3b6P59708 Gm18027-201ENSMUST00000218947 619 ntBASIC12.11□□□□□ -0.47
Sf3b6P59708 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.11□□□□□ -0.47
Sf3b6P59708 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.11□□□□□ -0.47
Sf3b6P59708 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3b6P59708 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3b6P59708 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Sf3b6P59708 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3b6P59708 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3b6P59708 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.11□□□□□ -0.47
Sf3b6P59708 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3b6P59708 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3b6P59708 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.11□□□□□ -0.47
Sf3b6P59708 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3b6P59708 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.11□□□□□ -0.47
Sf3b6P59708 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3b6P59708 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3b6P59708 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3b6P59708 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3b6P59708 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Sf3b6P59708 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3b6P59708 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3b6P59708 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3b6P59708 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3b6P59708 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3b6P59708 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3b6P59708 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3b6P59708 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.1□□□□□ -0.47
Sf3b6P59708 Gm4995-201ENSMUST00000117247 432 ntBASIC12.1□□□□□ -0.47
Sf3b6P59708 Gm11543-201ENSMUST00000120758 370 ntBASIC12.1□□□□□ -0.47
Sf3b6P59708 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.1□□□□□ -0.47
Sf3b6P59708 AA543401-201ENSMUST00000164248 1269 ntBASIC12.1□□□□□ -0.47
Sf3b6P59708 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3b6P59708 AA619741-201ENSMUST00000195095 646 ntBASIC12.1□□□□□ -0.47
Sf3b6P59708 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.1□□□□□ -0.47
Sf3b6P59708 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.1□□□□□ -0.47
Sf3b6P59708 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3b6P59708 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Sf3b6P59708 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3b6P59708 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3b6P59708 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3b6P59708 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3b6P59708 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Sf3b6P59708 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3b6P59708 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3b6P59708 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3b6P59708 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.1□□□□□ -0.47
Sf3b6P59708 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3b6P59708 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3b6P59708 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3b6P59708 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3b6P59708 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3b6P59708 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Sf3b6P59708 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3b6P59708 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3b6P59708 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Sf3b6P59708 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Sf3b6P59708 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.09□□□□□ -0.47
Sf3b6P59708 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3b6P59708 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3b6P59708 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3b6P59708 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3b6P59708 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Sf3b6P59708 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.09□□□□□ -0.47
Sf3b6P59708 Gm13823-201ENSMUST00000119930 345 ntBASIC12.09□□□□□ -0.47
Sf3b6P59708 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.09□□□□□ -0.47
Sf3b6P59708 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3b6P59708 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms