Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx1P48377 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx1P48377 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx1P48377 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Rfx1P48377 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx1P48377 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx1P48377 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx1P48377 Gm11745-201ENSMUST00000121669 448 ntBASIC16.29■□□□□ 0.2
Rfx1P48377 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx1P48377 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC16.29■□□□□ 0.2
Rfx1P48377 Gm37714-201ENSMUST00000194742 342 ntBASIC16.29■□□□□ 0.2
Rfx1P48377 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx1P48377 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx1P48377 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.29■□□□□ 0.2
Rfx1P48377 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.29■□□□□ 0.2
Rfx1P48377 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx1P48377 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx1P48377 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx1P48377 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx1P48377 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Rfx1P48377 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC16.29■□□□□ 0.2
Rfx1P48377 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx1P48377 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rfx1P48377 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx1P48377 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx1P48377 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx1P48377 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
Rfx1P48377 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Rfx1P48377 Gm10176-201ENSMUST00000159707 2264 ntBASIC16.28■□□□□ 0.2
Rfx1P48377 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx1P48377 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx1P48377 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Rfx1P48377 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Rfx1P48377 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx1P48377 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC16.28■□□□□ 0.2
Rfx1P48377 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx1P48377 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx1P48377 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC16.28■□□□□ 0.2
Rfx1P48377 Gm45453-201ENSMUST00000211758 853 ntBASIC16.28■□□□□ 0.2
Rfx1P48377 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx1P48377 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx1P48377 Mir497b-201ENSMUST00000093601 125 ntBASIC16.28■□□□□ 0.2
Rfx1P48377 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rfx1P48377 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.28■□□□□ 0.2
Rfx1P48377 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx1P48377 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC16.28■□□□□ 0.2
Rfx1P48377 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx1P48377 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx1P48377 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx1P48377 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx1P48377 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Rfx1P48377 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfx1P48377 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfx1P48377 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.2
Rfx1P48377 Gm43134-201ENSMUST00000199434 1886 ntBASIC16.27■□□□□ 0.2
Rfx1P48377 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfx1P48377 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rfx1P48377 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC16.27■□□□□ 0.2
Rfx1P48377 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfx1P48377 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.27■□□□□ 0.2
Rfx1P48377 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.27■□□□□ 0.2
Rfx1P48377 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC16.27■□□□□ 0.2
Rfx1P48377 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Rfx1P48377 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Rfx1P48377 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rfx1P48377 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC16.27■□□□□ 0.19
Rfx1P48377 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC16.27■□□□□ 0.19
Rfx1P48377 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC16.27■□□□□ 0.19
Rfx1P48377 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rfx1P48377 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rfx1P48377 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rfx1P48377 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rfx1P48377 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Rfx1P48377 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rfx1P48377 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
Rfx1P48377 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rfx1P48377 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rfx1P48377 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rfx1P48377 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rfx1P48377 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rfx1P48377 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx1P48377 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx1P48377 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx1P48377 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx1P48377 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.26■□□□□ 0.19
Rfx1P48377 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx1P48377 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC16.26■□□□□ 0.19
Rfx1P48377 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx1P48377 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC16.26■□□□□ 0.19
Rfx1P48377 AC117194.1-201ENSMUST00000224847 3002 ntBASIC16.26■□□□□ 0.19
Rfx1P48377 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx1P48377 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx1P48377 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx1P48377 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx1P48377 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx1P48377 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx1P48377 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
Rfx1P48377 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx1P48377 Gm8116-201ENSMUST00000182917 1201 ntBASIC16.26■□□□□ 0.19
Rfx1P48377 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms