Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.91□□□□□ -0.34
Cdx2P43241 Gm8762-201ENSMUST00000193486 339 ntBASIC12.91□□□□□ -0.34
Cdx2P43241 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.91□□□□□ -0.34
Cdx2P43241 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.91□□□□□ -0.34
Cdx2P43241 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.91□□□□□ -0.34
Cdx2P43241 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.91□□□□□ -0.34
Cdx2P43241 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdx2P43241 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cdx2P43241 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdx2P43241 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdx2P43241 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdx2P43241 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdx2P43241 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cdx2P43241 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdx2P43241 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdx2P43241 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdx2P43241 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.91□□□□□ -0.34
Cdx2P43241 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdx2P43241 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Cdx2P43241 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.91□□□□□ -0.34
Cdx2P43241 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdx2P43241 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdx2P43241 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.9□□□□□ -0.34
Cdx2P43241 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.9□□□□□ -0.34
Cdx2P43241 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx2P43241 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.9□□□□□ -0.34
Cdx2P43241 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx2P43241 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx2P43241 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx2P43241 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx2P43241 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx2P43241 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx2P43241 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx2P43241 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx2P43241 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.9□□□□□ -0.34
Cdx2P43241 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx2P43241 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx2P43241 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Cdx2P43241 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.9□□□□□ -0.34
Cdx2P43241 Gm13123-201ENSMUST00000122173 492 ntBASIC12.9□□□□□ -0.34
Cdx2P43241 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Cdx2P43241 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Cdx2P43241 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Cdx2P43241 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Cdx2P43241 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.9□□□□□ -0.34
Cdx2P43241 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.9□□□□□ -0.34
Cdx2P43241 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx2P43241 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.9□□□□□ -0.34
Cdx2P43241 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx2P43241 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx2P43241 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx2P43241 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx2P43241 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx2P43241 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx2P43241 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx2P43241 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Cdx2P43241 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx2P43241 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx2P43241 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx2P43241 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx2P43241 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.9□□□□□ -0.34
Cdx2P43241 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx2P43241 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx2P43241 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx2P43241 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.9□□□□□ -0.35
Cdx2P43241 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.35
Cdx2P43241 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Cdx2P43241 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Cdx2P43241 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Cdx2P43241 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdx2P43241 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.89□□□□□ -0.35
Cdx2P43241 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Cdx2P43241 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cdx2P43241 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdx2P43241 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdx2P43241 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdx2P43241 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.89□□□□□ -0.35
Cdx2P43241 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdx2P43241 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdx2P43241 Mir877-201ENSMUST00000104738 85 ntBASIC12.89□□□□□ -0.35
Cdx2P43241 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdx2P43241 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.89□□□□□ -0.35
Cdx2P43241 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cdx2P43241 Gm6222-202ENSMUST00000182143 629 ntBASIC12.89□□□□□ -0.35
Cdx2P43241 Gm37466-201ENSMUST00000195692 652 ntBASIC12.89□□□□□ -0.35
Cdx2P43241 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.89□□□□□ -0.35
Cdx2P43241 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cdx2P43241 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.89□□□□□ -0.35
Cdx2P43241 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.89□□□□□ -0.35
Cdx2P43241 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdx2P43241 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Cdx2P43241 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Cdx2P43241 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.89□□□□□ -0.35
Cdx2P43241 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdx2P43241 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Cdx2P43241 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdx2P43241 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdx2P43241 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Cdx2P43241 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdx2P43241 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms