Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Gm26464-201ENSMUST00000157094 305 ntBASIC12.51□□□□□ -0.41
Nkx2-2P42586 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.51□□□□□ -0.41
Nkx2-2P42586 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.51□□□□□ -0.41
Nkx2-2P42586 Gm44855-201ENSMUST00000205725 362 ntBASIC12.51□□□□□ -0.41
Nkx2-2P42586 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.51□□□□□ -0.41
Nkx2-2P42586 Gm6218-201ENSMUST00000219812 628 ntBASIC12.51□□□□□ -0.41
Nkx2-2P42586 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-2P42586 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-2P42586 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.51□□□□□ -0.41
Nkx2-2P42586 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.51□□□□□ -0.41
Nkx2-2P42586 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-2P42586 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Nkx2-2P42586 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.51□□□□□ -0.41
Nkx2-2P42586 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.51□□□□□ -0.41
Nkx2-2P42586 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.51□□□□□ -0.41
Nkx2-2P42586 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.51□□□□□ -0.41
Nkx2-2P42586 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-2P42586 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Nkx2-2P42586 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-2P42586 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Nkx2-2P42586 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx2-2P42586 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx2-2P42586 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx2-2P42586 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx2-2P42586 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx2-2P42586 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Nkx2-2P42586 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx2-2P42586 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx2-2P42586 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx2-2P42586 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx2-2P42586 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx2-2P42586 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx2-2P42586 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx2-2P42586 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Nkx2-2P42586 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx2-2P42586 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Nkx2-2P42586 Gm25925-201ENSMUST00000158314 306 ntBASIC12.5□□□□□ -0.41
Nkx2-2P42586 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.5□□□□□ -0.41
Nkx2-2P42586 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.5□□□□□ -0.41
Nkx2-2P42586 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.5□□□□□ -0.41
Nkx2-2P42586 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx2-2P42586 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx2-2P42586 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx2-2P42586 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx2-2P42586 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx2-2P42586 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.5□□□□□ -0.41
Nkx2-2P42586 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx2-2P42586 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx2-2P42586 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx2-2P42586 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx2-2P42586 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx2-2P42586 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx2-2P42586 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx2-2P42586 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx2-2P42586 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx2-2P42586 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Nkx2-2P42586 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Nkx2-2P42586 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx2-2P42586 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx2-2P42586 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx2-2P42586 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx2-2P42586 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Nkx2-2P42586 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx2-2P42586 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Nkx2-2P42586 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Nkx2-2P42586 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx2-2P42586 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Nkx2-2P42586 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx2-2P42586 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx2-2P42586 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx2-2P42586 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx2-2P42586 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx2-2P42586 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx2-2P42586 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx2-2P42586 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx2-2P42586 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx2-2P42586 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx2-2P42586 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx2-2P42586 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.49□□□□□ -0.41
Nkx2-2P42586 Gm15376-201ENSMUST00000122258 783 ntBASIC12.49□□□□□ -0.41
Nkx2-2P42586 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.49□□□□□ -0.41
Nkx2-2P42586 Gm27437-201ENSMUST00000183429 107 ntBASIC12.49□□□□□ -0.41
Nkx2-2P42586 Mir6977-201ENSMUST00000184960 64 ntBASIC12.49□□□□□ -0.41
Nkx2-2P42586 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Nkx2-2P42586 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.49□□□□□ -0.41
Nkx2-2P42586 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Nkx2-2P42586 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx2-2P42586 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx2-2P42586 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx2-2P42586 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx2-2P42586 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx2-2P42586 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.49□□□□□ -0.41
Nkx2-2P42586 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx2-2P42586 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx2-2P42586 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Nkx2-2P42586 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-2P42586 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-2P42586 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-2P42586 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Nkx2-2P42586 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms