Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Rfc1P35601 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC14.38□□□□□ -0.11
Rfc1P35601 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rfc1P35601 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Rfc1P35601 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rfc1P35601 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc1P35601 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.37□□□□□ -0.11
Rfc1P35601 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc1P35601 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc1P35601 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc1P35601 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rfc1P35601 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc1P35601 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc1P35601 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rfc1P35601 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc1P35601 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc1P35601 Gm9727-201ENSMUST00000161387 555 ntBASIC14.37□□□□□ -0.11
Rfc1P35601 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.37□□□□□ -0.11
Rfc1P35601 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.37□□□□□ -0.11
Rfc1P35601 Gm45747-201ENSMUST00000212203 999 ntBASIC14.37□□□□□ -0.11
Rfc1P35601 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.37□□□□□ -0.11
Rfc1P35601 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc1P35601 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc1P35601 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc1P35601 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc1P35601 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc1P35601 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc1P35601 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc1P35601 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc1P35601 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rfc1P35601 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc1P35601 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc1P35601 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc1P35601 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc1P35601 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc1P35601 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc1P35601 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc1P35601 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc1P35601 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc1P35601 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc1P35601 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc1P35601 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc1P35601 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rfc1P35601 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rfc1P35601 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc1P35601 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Rfc1P35601 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Rfc1P35601 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc1P35601 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Rfc1P35601 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc1P35601 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
Rfc1P35601 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc1P35601 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Rfc1P35601 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc1P35601 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.36□□□□□ -0.11
Rfc1P35601 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.36□□□□□ -0.11
Rfc1P35601 Gm27301-201ENSMUST00000184012 127 ntBASIC14.36□□□□□ -0.11
Rfc1P35601 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc1P35601 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc1P35601 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc1P35601 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc1P35601 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Rfc1P35601 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rfc1P35601 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc1P35601 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rfc1P35601 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc1P35601 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc1P35601 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc1P35601 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc1P35601 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rfc1P35601 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rfc1P35601 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc1P35601 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc1P35601 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc1P35601 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc1P35601 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rfc1P35601 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc1P35601 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc1P35601 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc1P35601 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc1P35601 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Rfc1P35601 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc1P35601 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc1P35601 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc1P35601 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc1P35601 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc1P35601 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Rfc1P35601 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc1P35601 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc1P35601 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc1P35601 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc1P35601 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc1P35601 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.35□□□□□ -0.11
Rfc1P35601 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc1P35601 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.35□□□□□ -0.11
Rfc1P35601 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc1P35601 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.35□□□□□ -0.11
Rfc1P35601 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc1P35601 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rfc1P35601 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms