Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sftpa1P35242 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sftpa1P35242 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.56□□□□□ -0.4
Sftpa1P35242 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sftpa1P35242 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sftpa1P35242 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sftpa1P35242 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sftpa1P35242 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sftpa1P35242 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sftpa1P35242 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sftpa1P35242 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sftpa1P35242 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sftpa1P35242 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Sftpa1P35242 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.55□□□□□ -0.4
Sftpa1P35242 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sftpa1P35242 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sftpa1P35242 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sftpa1P35242 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sftpa1P35242 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sftpa1P35242 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sftpa1P35242 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sftpa1P35242 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sftpa1P35242 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Sftpa1P35242 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Sftpa1P35242 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Sftpa1P35242 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Sftpa1P35242 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Sftpa1P35242 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Sftpa1P35242 Gm13786-201ENSMUST00000122371 333 ntBASIC12.55□□□□□ -0.4
Sftpa1P35242 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.55□□□□□ -0.4
Sftpa1P35242 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.55□□□□□ -0.4
Sftpa1P35242 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.55□□□□□ -0.4
Sftpa1P35242 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sftpa1P35242 Gm6621-201ENSMUST00000193251 772 ntBASIC12.55□□□□□ -0.4
Sftpa1P35242 Gm38158-201ENSMUST00000194617 339 ntBASIC12.55□□□□□ -0.4
Sftpa1P35242 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.55□□□□□ -0.4
Sftpa1P35242 Gm8227-201ENSMUST00000223306 571 ntBASIC12.55□□□□□ -0.4
Sftpa1P35242 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sftpa1P35242 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sftpa1P35242 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Sftpa1P35242 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.55□□□□□ -0.4
Sftpa1P35242 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.55□□□□□ -0.4
Sftpa1P35242 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sftpa1P35242 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sftpa1P35242 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.55□□□□□ -0.4
Sftpa1P35242 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sftpa1P35242 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Sftpa1P35242 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sftpa1P35242 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sftpa1P35242 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sftpa1P35242 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sftpa1P35242 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sftpa1P35242 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.54□□□□□ -0.4
Sftpa1P35242 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sftpa1P35242 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sftpa1P35242 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Sftpa1P35242 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sftpa1P35242 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Sftpa1P35242 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sftpa1P35242 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sftpa1P35242 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sftpa1P35242 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sftpa1P35242 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sftpa1P35242 Gm24255-201ENSMUST00000104481 128 ntBASIC12.54□□□□□ -0.4
Sftpa1P35242 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Sftpa1P35242 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sftpa1P35242 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.54□□□□□ -0.4
Sftpa1P35242 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.54□□□□□ -0.4
Sftpa1P35242 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.54□□□□□ -0.4
Sftpa1P35242 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.54□□□□□ -0.4
Sftpa1P35242 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Sftpa1P35242 Gm12403-201ENSMUST00000121384 959 ntBASIC12.54□□□□□ -0.4
Sftpa1P35242 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.54□□□□□ -0.4
Sftpa1P35242 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sftpa1P35242 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.54□□□□□ -0.4
Sftpa1P35242 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.54□□□□□ -0.4
Sftpa1P35242 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.54□□□□□ -0.4
Sftpa1P35242 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.54□□□□□ -0.4
Sftpa1P35242 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.54□□□□□ -0.4
Sftpa1P35242 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.54□□□□□ -0.4
Sftpa1P35242 Gm27320-201ENSMUST00000184892 109 ntBASIC12.54□□□□□ -0.4
Sftpa1P35242 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.54□□□□□ -0.4
Sftpa1P35242 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.54□□□□□ -0.4
Sftpa1P35242 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sftpa1P35242 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sftpa1P35242 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sftpa1P35242 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Sftpa1P35242 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sftpa1P35242 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Sftpa1P35242 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sftpa1P35242 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sftpa1P35242 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sftpa1P35242 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sftpa1P35242 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sftpa1P35242 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Sftpa1P35242 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.54□□□□□ -0.4
Sftpa1P35242 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sftpa1P35242 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sftpa1P35242 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.54□□□□□ -0.4
Sftpa1P35242 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms