Protein–RNA interactions for Protein: P28653

Bgn, Biglycan, mousemouse

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BgnP28653 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
BgnP28653 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.63□□□□□ -0.39
BgnP28653 Gm7461-201ENSMUST00000058918 827 ntBASIC12.63□□□□□ -0.39
BgnP28653 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BgnP28653 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BgnP28653 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
BgnP28653 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
BgnP28653 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
BgnP28653 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
BgnP28653 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
BgnP28653 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
BgnP28653 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
BgnP28653 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.63□□□□□ -0.39
BgnP28653 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
BgnP28653 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
BgnP28653 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
BgnP28653 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BgnP28653 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BgnP28653 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BgnP28653 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BgnP28653 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BgnP28653 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BgnP28653 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.62□□□□□ -0.39
BgnP28653 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BgnP28653 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BgnP28653 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
BgnP28653 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
BgnP28653 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BgnP28653 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BgnP28653 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BgnP28653 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BgnP28653 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.62□□□□□ -0.39
BgnP28653 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.62□□□□□ -0.39
BgnP28653 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BgnP28653 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.62□□□□□ -0.39
BgnP28653 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BgnP28653 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BgnP28653 Ank2-226ENSMUST00000189368 339 ntBASIC12.62□□□□□ -0.39
BgnP28653 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.62□□□□□ -0.39
BgnP28653 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BgnP28653 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BgnP28653 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
BgnP28653 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BgnP28653 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
BgnP28653 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BgnP28653 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BgnP28653 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BgnP28653 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BgnP28653 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
BgnP28653 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.62□□□□□ -0.39
BgnP28653 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
BgnP28653 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BgnP28653 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BgnP28653 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
BgnP28653 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BgnP28653 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.62□□□□□ -0.39
BgnP28653 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.62□□□□□ -0.39
BgnP28653 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.61□□□□□ -0.39
BgnP28653 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BgnP28653 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BgnP28653 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
BgnP28653 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BgnP28653 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
BgnP28653 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BgnP28653 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
BgnP28653 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BgnP28653 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
BgnP28653 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
BgnP28653 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.61□□□□□ -0.39
BgnP28653 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.61□□□□□ -0.39
BgnP28653 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
BgnP28653 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.61□□□□□ -0.39
BgnP28653 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.61□□□□□ -0.39
BgnP28653 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
BgnP28653 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
BgnP28653 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
BgnP28653 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BgnP28653 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
BgnP28653 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
BgnP28653 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BgnP28653 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.61□□□□□ -0.39
BgnP28653 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
BgnP28653 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
BgnP28653 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
BgnP28653 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
BgnP28653 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
BgnP28653 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BgnP28653 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
BgnP28653 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BgnP28653 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.61□□□□□ -0.39
BgnP28653 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.61□□□□□ -0.39
BgnP28653 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
BgnP28653 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.6□□□□□ -0.39
BgnP28653 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
BgnP28653 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BgnP28653 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.6□□□□□ -0.39
BgnP28653 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
BgnP28653 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BgnP28653 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BgnP28653 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms