Protein–RNA interactions for Protein: P27048

Snrpb, Small nuclear ribonucleoprotein-associated protein B, mousemouse

Known RBP Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SnrpbP27048 Gm45399-201ENSMUST00000209955 1016 ntBASIC12.1□□□□□ -0.47
SnrpbP27048 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC12.1□□□□□ -0.47
SnrpbP27048 Thap2-203ENSMUST00000218989 527 ntBASIC12.1□□□□□ -0.47
SnrpbP27048 AC162940.1-201ENSMUST00000224745 1167 ntBASIC12.1□□□□□ -0.47
SnrpbP27048 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
SnrpbP27048 Birc2-201ENSMUST00000054878 378 ntBASIC12.1□□□□□ -0.47
SnrpbP27048 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SnrpbP27048 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SnrpbP27048 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SnrpbP27048 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SnrpbP27048 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SnrpbP27048 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
SnrpbP27048 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.1□□□□□ -0.47
SnrpbP27048 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
SnrpbP27048 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SnrpbP27048 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SnrpbP27048 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
SnrpbP27048 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SnrpbP27048 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SnrpbP27048 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SnrpbP27048 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SnrpbP27048 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SnrpbP27048 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
SnrpbP27048 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SnrpbP27048 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SnrpbP27048 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SnrpbP27048 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SnrpbP27048 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SnrpbP27048 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SnrpbP27048 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SnrpbP27048 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SnrpbP27048 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SnrpbP27048 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SnrpbP27048 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SnrpbP27048 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.09□□□□□ -0.47
SnrpbP27048 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SnrpbP27048 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
SnrpbP27048 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SnrpbP27048 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SnrpbP27048 Gm7862-201ENSMUST00000121461 292 ntBASIC12.09□□□□□ -0.47
SnrpbP27048 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SnrpbP27048 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SnrpbP27048 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SnrpbP27048 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SnrpbP27048 Gm43906-201ENSMUST00000203194 906 ntBASIC12.09□□□□□ -0.47
SnrpbP27048 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SnrpbP27048 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SnrpbP27048 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SnrpbP27048 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SnrpbP27048 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SnrpbP27048 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SnrpbP27048 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SnrpbP27048 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.09□□□□□ -0.47
SnrpbP27048 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SnrpbP27048 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SnrpbP27048 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.09□□□□□ -0.47
SnrpbP27048 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SnrpbP27048 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SnrpbP27048 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SnrpbP27048 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SnrpbP27048 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SnrpbP27048 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
SnrpbP27048 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
SnrpbP27048 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SnrpbP27048 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
SnrpbP27048 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.08□□□□□ -0.48
SnrpbP27048 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SnrpbP27048 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
SnrpbP27048 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SnrpbP27048 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SnrpbP27048 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SnrpbP27048 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SnrpbP27048 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SnrpbP27048 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SnrpbP27048 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SnrpbP27048 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SnrpbP27048 Gm15074-201ENSMUST00000117603 936 ntBASIC12.08□□□□□ -0.48
SnrpbP27048 Gm13744-201ENSMUST00000118953 850 ntBASIC12.08□□□□□ -0.48
SnrpbP27048 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SnrpbP27048 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SnrpbP27048 Cgrrf1-203ENSMUST00000133989 873 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SnrpbP27048 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SnrpbP27048 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC12.08□□□□□ -0.48
SnrpbP27048 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
SnrpbP27048 Gm27301-201ENSMUST00000184012 127 ntBASIC12.08□□□□□ -0.48
SnrpbP27048 Gm28033-201ENSMUST00000184224 96 ntBASIC12.08□□□□□ -0.48
SnrpbP27048 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SnrpbP27048 Gm37213-201ENSMUST00000193077 586 ntBASIC12.08□□□□□ -0.48
SnrpbP27048 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.08□□□□□ -0.48
SnrpbP27048 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC12.08□□□□□ -0.48
SnrpbP27048 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
SnrpbP27048 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.08□□□□□ -0.48
SnrpbP27048 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SnrpbP27048 Acrbp-201ENSMUST00000032481 584 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SnrpbP27048 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
SnrpbP27048 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SnrpbP27048 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SnrpbP27048 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.08□□□□□ -0.48
SnrpbP27048 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SnrpbP27048 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms