Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cbx3P23198 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cbx3P23198 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cbx3P23198 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cbx3P23198 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cbx3P23198 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cbx3P23198 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Cbx3P23198 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cbx3P23198 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cbx3P23198 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cbx3P23198 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cbx3P23198 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cbx3P23198 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cbx3P23198 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.41□□□□□ -0.42
Cbx3P23198 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cbx3P23198 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cbx3P23198 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.41□□□□□ -0.42
Cbx3P23198 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cbx3P23198 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cbx3P23198 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cbx3P23198 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cbx3P23198 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cbx3P23198 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cbx3P23198 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cbx3P23198 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.41□□□□□ -0.42
Cbx3P23198 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cbx3P23198 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cbx3P23198 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cbx3P23198 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cbx3P23198 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cbx3P23198 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cbx3P23198 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.41□□□□□ -0.42
Cbx3P23198 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cbx3P23198 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cbx3P23198 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cbx3P23198 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cbx3P23198 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cbx3P23198 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cbx3P23198 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cbx3P23198 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cbx3P23198 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cbx3P23198 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.4□□□□□ -0.42
Cbx3P23198 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cbx3P23198 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cbx3P23198 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.4□□□□□ -0.42
Cbx3P23198 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.4□□□□□ -0.42
Cbx3P23198 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Cbx3P23198 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cbx3P23198 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Cbx3P23198 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cbx3P23198 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cbx3P23198 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Cbx3P23198 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cbx3P23198 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cbx3P23198 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cbx3P23198 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.4□□□□□ -0.42
Cbx3P23198 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cbx3P23198 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cbx3P23198 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cbx3P23198 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cbx3P23198 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cbx3P23198 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.4□□□□□ -0.42
Cbx3P23198 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cbx3P23198 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Cbx3P23198 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cbx3P23198 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cbx3P23198 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cbx3P23198 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cbx3P23198 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cbx3P23198 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cbx3P23198 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cbx3P23198 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cbx3P23198 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cbx3P23198 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cbx3P23198 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cbx3P23198 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cbx3P23198 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cbx3P23198 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cbx3P23198 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Cbx3P23198 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cbx3P23198 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cbx3P23198 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cbx3P23198 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cbx3P23198 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cbx3P23198 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cbx3P23198 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cbx3P23198 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Cbx3P23198 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.39□□□□□ -0.43
Cbx3P23198 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cbx3P23198 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.39□□□□□ -0.43
Cbx3P23198 Gm6296-201ENSMUST00000222599 943 ntBASIC12.39□□□□□ -0.43
Cbx3P23198 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.39□□□□□ -0.43
Cbx3P23198 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Cbx3P23198 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cbx3P23198 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cbx3P23198 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cbx3P23198 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
Cbx3P23198 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cbx3P23198 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC12.39□□□□□ -0.43
Cbx3P23198 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms