Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfrsf9P20334 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfrsf9P20334 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfrsf9P20334 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfrsf9P20334 Map1b-203ENSMUST00000223725 2669 ntBASIC11.27□□□□□ -0.61
Tnfrsf9P20334 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Tnfrsf9P20334 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfrsf9P20334 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfrsf9P20334 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfrsf9P20334 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Tnfrsf9P20334 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfrsf9P20334 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfrsf9P20334 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfrsf9P20334 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfrsf9P20334 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Tnfrsf9P20334 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfrsf9P20334 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfrsf9P20334 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfrsf9P20334 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Gm15806-201ENSMUST00000120696 955 ntBASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Gm27631-201ENSMUST00000184163 466 ntBASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Gm36943-201ENSMUST00000194422 282 ntBASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Tnfrsf9P20334 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.26□□□□□ -0.61
Tnfrsf9P20334 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.26□□□□□ -0.61
Tnfrsf9P20334 AC106830.1-201ENSMUST00000228032 1003 ntBASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfrsf9P20334 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Gm43195-201ENSMUST00000200614 2332 ntBASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Gm4984-201ENSMUST00000115987 360 ntBASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.25□□□□□ -0.61
Tnfrsf9P20334 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Gm29310-201ENSMUST00000185468 696 ntBASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Gm21825-201ENSMUST00000185728 696 ntBASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Gm29109-201ENSMUST00000185895 696 ntBASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Gm21896-201ENSMUST00000186520 696 ntBASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Gm21873-201ENSMUST00000186728 696 ntBASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Gm21794-201ENSMUST00000187056 696 ntBASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Gm21880-201ENSMUST00000187275 696 ntBASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Gm21826-201ENSMUST00000187451 696 ntBASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Gm21198-201ENSMUST00000188393 696 ntBASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Gm21749-201ENSMUST00000189343 696 ntBASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Gm21901-201ENSMUST00000189568 696 ntBASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Gm29424-201ENSMUST00000189716 696 ntBASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Gm28599-201ENSMUST00000189838 694 ntBASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Gm21867-201ENSMUST00000189917 696 ntBASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms