Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl1P12850 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl1P12850 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl1P12850 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl1P12850 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Cxcl1P12850 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl1P12850 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl1P12850 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl1P12850 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Cxcl1P12850 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl1P12850 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC11.29□□□□□ -0.6
Cxcl1P12850 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC11.29□□□□□ -0.6
Cxcl1P12850 Gm5566-201ENSMUST00000116118 459 ntBASIC11.29□□□□□ -0.6
Cxcl1P12850 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Cxcl1P12850 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl1P12850 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl1P12850 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.29□□□□□ -0.6
Cxcl1P12850 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC11.29□□□□□ -0.6
Cxcl1P12850 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC11.29□□□□□ -0.6
Cxcl1P12850 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Cxcl1P12850 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC11.29□□□□□ -0.6
Cxcl1P12850 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC11.29□□□□□ -0.6
Cxcl1P12850 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl1P12850 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC11.29□□□□□ -0.6
Cxcl1P12850 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Cxcl1P12850 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl1P12850 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl1P12850 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl1P12850 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl1P12850 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl1P12850 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl1P12850 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl1P12850 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl1P12850 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl1P12850 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Cxcl1P12850 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl1P12850 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl1P12850 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl1P12850 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl1P12850 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl1P12850 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl1P12850 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl1P12850 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl1P12850 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Cxcl1P12850 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl1P12850 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl1P12850 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Cxcl1P12850 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl1P12850 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl1P12850 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.28□□□□□ -0.6
Cxcl1P12850 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.28□□□□□ -0.6
Cxcl1P12850 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.28□□□□□ -0.6
Cxcl1P12850 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl1P12850 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl1P12850 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC11.28□□□□□ -0.6
Cxcl1P12850 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC11.28□□□□□ -0.6
Cxcl1P12850 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Cxcl1P12850 Gm9719-201ENSMUST00000162765 543 ntBASIC11.28□□□□□ -0.6
Cxcl1P12850 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl1P12850 Gm9824-201ENSMUST00000178707 561 ntBASIC11.28□□□□□ -0.6
Cxcl1P12850 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC11.28□□□□□ -0.6
Cxcl1P12850 Gm6916-202ENSMUST00000205523 195 ntBASIC11.28□□□□□ -0.6
Cxcl1P12850 AC155252.2-201ENSMUST00000226946 680 ntBASIC11.28□□□□□ -0.6
Cxcl1P12850 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl1P12850 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Cxcl1P12850 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl1P12850 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl1P12850 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Cxcl1P12850 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl1P12850 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl1P12850 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl1P12850 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl1P12850 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl1P12850 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl1P12850 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Cxcl1P12850 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl1P12850 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl1P12850 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl1P12850 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl1P12850 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl1P12850 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl1P12850 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Cxcl1P12850 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Cxcl1P12850 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl1P12850 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cxcl1P12850 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Cxcl1P12850 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.6
Cxcl1P12850 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cxcl1P12850 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.27□□□□□ -0.6
Cxcl1P12850 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Cxcl1P12850 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcl1P12850 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Cxcl1P12850 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcl1P12850 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcl1P12850 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Cxcl1P12850 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcl1P12850 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcl1P12850 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcl1P12850 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcl1P12850 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms