Protein–RNA interactions for Protein: P12813

Nr4a1, Nuclear receptor subfamily 4 group A member 1, mousemouse

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr4a1P12813 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nr4a1P12813 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nr4a1P12813 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nr4a1P12813 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nr4a1P12813 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nr4a1P12813 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nr4a1P12813 Gm13453-201ENSMUST00000118708 357 ntBASIC12.78□□□□□ -0.36
Nr4a1P12813 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.78□□□□□ -0.36
Nr4a1P12813 Gm20949-201ENSMUST00000206478 952 ntBASIC12.78□□□□□ -0.36
Nr4a1P12813 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.78□□□□□ -0.36
Nr4a1P12813 Gm18041-201ENSMUST00000218210 618 ntBASIC12.78□□□□□ -0.36
Nr4a1P12813 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.78□□□□□ -0.36
Nr4a1P12813 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.78□□□□□ -0.36
Nr4a1P12813 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nr4a1P12813 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nr4a1P12813 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nr4a1P12813 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Nr4a1P12813 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nr4a1P12813 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nr4a1P12813 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nr4a1P12813 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nr4a1P12813 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nr4a1P12813 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nr4a1P12813 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nr4a1P12813 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.78□□□□□ -0.36
Nr4a1P12813 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Nr4a1P12813 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nr4a1P12813 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nr4a1P12813 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Nr4a1P12813 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.78□□□□□ -0.36
Nr4a1P12813 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.78□□□□□ -0.36
Nr4a1P12813 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Nr4a1P12813 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nr4a1P12813 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nr4a1P12813 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nr4a1P12813 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
Nr4a1P12813 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Nr4a1P12813 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nr4a1P12813 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nr4a1P12813 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Nr4a1P12813 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Nr4a1P12813 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nr4a1P12813 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
Nr4a1P12813 Gm24543-201ENSMUST00000103867 82 ntBASIC12.77□□□□□ -0.37
Nr4a1P12813 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Nr4a1P12813 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nr4a1P12813 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nr4a1P12813 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.77□□□□□ -0.37
Nr4a1P12813 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nr4a1P12813 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.77□□□□□ -0.37
Nr4a1P12813 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nr4a1P12813 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Nr4a1P12813 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nr4a1P12813 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.77□□□□□ -0.37
Nr4a1P12813 Gm45453-201ENSMUST00000211758 853 ntBASIC12.77□□□□□ -0.37
Nr4a1P12813 Gm6888-201ENSMUST00000221983 706 ntBASIC12.77□□□□□ -0.37
Nr4a1P12813 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.77□□□□□ -0.37
Nr4a1P12813 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nr4a1P12813 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nr4a1P12813 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nr4a1P12813 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nr4a1P12813 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Nr4a1P12813 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nr4a1P12813 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nr4a1P12813 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nr4a1P12813 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.77□□□□□ -0.37
Nr4a1P12813 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nr4a1P12813 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nr4a1P12813 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nr4a1P12813 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nr4a1P12813 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nr4a1P12813 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nr4a1P12813 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nr4a1P12813 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nr4a1P12813 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nr4a1P12813 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nr4a1P12813 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nr4a1P12813 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nr4a1P12813 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.76□□□□□ -0.37
Nr4a1P12813 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nr4a1P12813 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.76□□□□□ -0.37
Nr4a1P12813 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nr4a1P12813 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nr4a1P12813 Gm27533-201ENSMUST00000183800 152 ntBASIC12.76□□□□□ -0.37
Nr4a1P12813 Gm29741-201ENSMUST00000192667 421 ntBASIC12.76□□□□□ -0.37
Nr4a1P12813 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nr4a1P12813 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nr4a1P12813 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.76□□□□□ -0.37
Nr4a1P12813 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nr4a1P12813 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Nr4a1P12813 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nr4a1P12813 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nr4a1P12813 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nr4a1P12813 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Nr4a1P12813 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.76□□□□□ -0.37
Nr4a1P12813 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nr4a1P12813 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nr4a1P12813 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nr4a1P12813 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nr4a1P12813 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms