Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl3P10855 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12□□□□□ -0.49
Ccl3P10855 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl3P10855 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccl3P10855 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl3P10855 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl3P10855 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12□□□□□ -0.49
Ccl3P10855 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12□□□□□ -0.49
Ccl3P10855 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12□□□□□ -0.49
Ccl3P10855 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccl3P10855 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12□□□□□ -0.49
Ccl3P10855 AC134254.1-201ENSMUST00000221362 167 ntBASIC12□□□□□ -0.49
Ccl3P10855 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl3P10855 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccl3P10855 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12□□□□□ -0.49
Ccl3P10855 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl3P10855 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl3P10855 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ccl3P10855 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccl3P10855 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl3P10855 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12□□□□□ -0.49
Ccl3P10855 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Ccl3P10855 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12□□□□□ -0.49
Ccl3P10855 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl3P10855 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Ccl3P10855 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl3P10855 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccl3P10855 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12□□□□□ -0.49
Ccl3P10855 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl3P10855 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl3P10855 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl3P10855 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ccl3P10855 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.99□□□□□ -0.49
Ccl3P10855 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl3P10855 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl3P10855 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl3P10855 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC11.99□□□□□ -0.49
Ccl3P10855 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl3P10855 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl3P10855 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl3P10855 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.99□□□□□ -0.49
Ccl3P10855 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl3P10855 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl3P10855 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.99□□□□□ -0.49
Ccl3P10855 Gm16379-201ENSMUST00000161469 348 ntBASIC11.99□□□□□ -0.49
Ccl3P10855 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.99□□□□□ -0.49
Ccl3P10855 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.99□□□□□ -0.49
Ccl3P10855 Gm29396-201ENSMUST00000185659 716 ntBASIC11.99□□□□□ -0.49
Ccl3P10855 Gm4857-201ENSMUST00000192718 785 ntBASIC11.99□□□□□ -0.49
Ccl3P10855 Gm8762-201ENSMUST00000193486 339 ntBASIC11.99□□□□□ -0.49
Ccl3P10855 Gm38341-201ENSMUST00000195357 515 ntBASIC11.99□□□□□ -0.49
Ccl3P10855 Gm6334-201ENSMUST00000207083 228 ntBASIC11.99□□□□□ -0.49
Ccl3P10855 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.99□□□□□ -0.49
Ccl3P10855 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.99□□□□□ -0.49
Ccl3P10855 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl3P10855 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl3P10855 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl3P10855 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl3P10855 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Ccl3P10855 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.99□□□□□ -0.49
Ccl3P10855 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Ccl3P10855 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl3P10855 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl3P10855 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl3P10855 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl3P10855 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl3P10855 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl3P10855 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl3P10855 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl3P10855 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl3P10855 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl3P10855 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl3P10855 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl3P10855 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl3P10855 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl3P10855 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl3P10855 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl3P10855 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl3P10855 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl3P10855 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl3P10855 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl3P10855 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl3P10855 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl3P10855 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl3P10855 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl3P10855 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.98□□□□□ -0.49
Ccl3P10855 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl3P10855 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl3P10855 Gm12241-201ENSMUST00000118330 726 ntBASIC11.98□□□□□ -0.49
Ccl3P10855 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.98□□□□□ -0.49
Ccl3P10855 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl3P10855 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.98□□□□□ -0.49
Ccl3P10855 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.98□□□□□ -0.49
Ccl3P10855 Gm18056-201ENSMUST00000207670 568 ntBASIC11.98□□□□□ -0.49
Ccl3P10855 Gm18061-201ENSMUST00000208350 562 ntBASIC11.98□□□□□ -0.49
Ccl3P10855 Gm18063-201ENSMUST00000208529 568 ntBASIC11.98□□□□□ -0.49
Ccl3P10855 Gm18052-201ENSMUST00000208750 559 ntBASIC11.98□□□□□ -0.49
Ccl3P10855 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Ccl3P10855 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Ccl3P10855 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms