Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm24694-201ENSMUST00000180054 110 ntBASIC14.87□□□□□ -0.03
Chmp6P0C0A3 Gm27663-201ENSMUST00000184839 110 ntBASIC14.87□□□□□ -0.03
Chmp6P0C0A3 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.87□□□□□ -0.03
Chmp6P0C0A3 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp6P0C0A3 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Chmp6P0C0A3 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp6P0C0A3 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp6P0C0A3 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp6P0C0A3 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp6P0C0A3 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp6P0C0A3 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp6P0C0A3 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Chmp6P0C0A3 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp6P0C0A3 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp6P0C0A3 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp6P0C0A3 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp6P0C0A3 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp6P0C0A3 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.87□□□□□ -0.03
Chmp6P0C0A3 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp6P0C0A3 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.87□□□□□ -0.03
Chmp6P0C0A3 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.87□□□□□ -0.03
Chmp6P0C0A3 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp6P0C0A3 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp6P0C0A3 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp6P0C0A3 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp6P0C0A3 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Gm15321-201ENSMUST00000121290 288 ntBASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Gm6218-201ENSMUST00000219812 628 ntBASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp6P0C0A3 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.85□□□□□ -0.03
Chmp6P0C0A3 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp6P0C0A3 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Chmp6P0C0A3 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp6P0C0A3 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp6P0C0A3 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Chmp6P0C0A3 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Chmp6P0C0A3 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp6P0C0A3 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp6P0C0A3 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp6P0C0A3 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp6P0C0A3 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp6P0C0A3 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Chmp6P0C0A3 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp6P0C0A3 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.85□□□□□ -0.03
Chmp6P0C0A3 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.85□□□□□ -0.03
Chmp6P0C0A3 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.85□□□□□ -0.03
Chmp6P0C0A3 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp6P0C0A3 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp6P0C0A3 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.85□□□□□ -0.03
Chmp6P0C0A3 Gm10766-202ENSMUST00000194123 606 ntBASIC14.85□□□□□ -0.03
Chmp6P0C0A3 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp6P0C0A3 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp6P0C0A3 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Chmp6P0C0A3 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.85□□□□□ -0.03
Chmp6P0C0A3 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp6P0C0A3 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms