Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ApoeP08226 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ApoeP08226 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ApoeP08226 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ApoeP08226 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ApoeP08226 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ApoeP08226 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ApoeP08226 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ApoeP08226 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
ApoeP08226 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ApoeP08226 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ApoeP08226 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.91□□□□□ -0.34
ApoeP08226 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
ApoeP08226 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.9□□□□□ -0.34
ApoeP08226 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
ApoeP08226 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ApoeP08226 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ApoeP08226 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ApoeP08226 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
ApoeP08226 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ApoeP08226 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ApoeP08226 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ApoeP08226 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ApoeP08226 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ApoeP08226 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ApoeP08226 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
ApoeP08226 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
ApoeP08226 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ApoeP08226 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ApoeP08226 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ApoeP08226 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
ApoeP08226 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.9□□□□□ -0.34
ApoeP08226 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.9□□□□□ -0.34
ApoeP08226 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.9□□□□□ -0.34
ApoeP08226 Gm2651-201ENSMUST00000203560 838 ntBASIC12.9□□□□□ -0.34
ApoeP08226 Gm45453-201ENSMUST00000211758 853 ntBASIC12.9□□□□□ -0.34
ApoeP08226 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ApoeP08226 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.9□□□□□ -0.34
ApoeP08226 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ApoeP08226 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ApoeP08226 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ApoeP08226 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.9□□□□□ -0.34
ApoeP08226 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ApoeP08226 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ApoeP08226 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
ApoeP08226 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.9□□□□□ -0.34
ApoeP08226 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ApoeP08226 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ApoeP08226 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ApoeP08226 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ApoeP08226 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ApoeP08226 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
ApoeP08226 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.35
ApoeP08226 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
ApoeP08226 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
ApoeP08226 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
ApoeP08226 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
ApoeP08226 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ApoeP08226 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
ApoeP08226 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ApoeP08226 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ApoeP08226 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ApoeP08226 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ApoeP08226 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
ApoeP08226 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
ApoeP08226 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
ApoeP08226 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ApoeP08226 Mir698-201ENSMUST00000102164 109 ntBASIC12.89□□□□□ -0.35
ApoeP08226 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ApoeP08226 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
ApoeP08226 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
ApoeP08226 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ApoeP08226 Gm38225-201ENSMUST00000194001 393 ntBASIC12.89□□□□□ -0.35
ApoeP08226 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.89□□□□□ -0.35
ApoeP08226 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC12.89□□□□□ -0.35
ApoeP08226 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.89□□□□□ -0.35
ApoeP08226 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.89□□□□□ -0.35
ApoeP08226 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.89□□□□□ -0.35
ApoeP08226 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ApoeP08226 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ApoeP08226 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
ApoeP08226 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ApoeP08226 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ApoeP08226 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
ApoeP08226 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
ApoeP08226 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
ApoeP08226 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ApoeP08226 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ApoeP08226 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ApoeP08226 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ApoeP08226 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ApoeP08226 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ApoeP08226 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ApoeP08226 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
ApoeP08226 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.89□□□□□ -0.35
ApoeP08226 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ApoeP08226 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ApoeP08226 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
ApoeP08226 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ApoeP08226 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms