Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.45□□□□□ -0.42
Col4a2P08122 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a2P08122 Gm37489-201ENSMUST00000191883 159 ntBASIC12.45□□□□□ -0.42
Col4a2P08122 Gm4768-201ENSMUST00000206199 686 ntBASIC12.45□□□□□ -0.42
Col4a2P08122 Gm10608-202ENSMUST00000213924 676 ntBASIC12.45□□□□□ -0.42
Col4a2P08122 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a2P08122 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Col4a2P08122 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Col4a2P08122 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.45□□□□□ -0.42
Col4a2P08122 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a2P08122 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Col4a2P08122 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a2P08122 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a2P08122 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a2P08122 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a2P08122 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a2P08122 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Col4a2P08122 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a2P08122 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a2P08122 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a2P08122 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a2P08122 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Col4a2P08122 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a2P08122 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a2P08122 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a2P08122 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a2P08122 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a2P08122 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a2P08122 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.44□□□□□ -0.42
Col4a2P08122 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a2P08122 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Col4a2P08122 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.44□□□□□ -0.42
Col4a2P08122 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.44□□□□□ -0.42
Col4a2P08122 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a2P08122 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a2P08122 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.44□□□□□ -0.42
Col4a2P08122 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.44□□□□□ -0.42
Col4a2P08122 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a2P08122 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a2P08122 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a2P08122 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a2P08122 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a2P08122 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Col4a2P08122 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a2P08122 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a2P08122 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a2P08122 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a2P08122 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Col4a2P08122 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a2P08122 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.44□□□□□ -0.42
Col4a2P08122 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Col4a2P08122 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a2P08122 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Col4a2P08122 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Col4a2P08122 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a2P08122 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a2P08122 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a2P08122 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.43□□□□□ -0.42
Col4a2P08122 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Col4a2P08122 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a2P08122 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.43□□□□□ -0.42
Col4a2P08122 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a2P08122 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a2P08122 Snord83b-201ENSMUST00000104546 94 ntBASIC12.43□□□□□ -0.42
Col4a2P08122 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.43□□□□□ -0.42
Col4a2P08122 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a2P08122 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.43□□□□□ -0.42
Col4a2P08122 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.43□□□□□ -0.42
Col4a2P08122 Gm25668-201ENSMUST00000157700 129 ntBASIC12.43□□□□□ -0.42
Col4a2P08122 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a2P08122 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.43□□□□□ -0.42
Col4a2P08122 Morn2-202ENSMUST00000227729 656 ntBASIC12.43□□□□□ -0.42
Col4a2P08122 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Col4a2P08122 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a2P08122 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.43□□□□□ -0.42
Col4a2P08122 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a2P08122 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a2P08122 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a2P08122 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a2P08122 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a2P08122 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a2P08122 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a2P08122 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a2P08122 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a2P08122 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a2P08122 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.43□□□□□ -0.42
Col4a2P08122 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a2P08122 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a2P08122 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a2P08122 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a2P08122 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a2P08122 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Col4a2P08122 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.43□□□□□ -0.42
Col4a2P08122 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a2P08122 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a2P08122 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a2P08122 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a2P08122 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.42□□□□□ -0.42
Col4a2P08122 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.42□□□□□ -0.42
Col4a2P08122 Gm45186-201ENSMUST00000206874 478 ntBASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms