Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.16□□□□□ -0.46
P06344 Gm18307-201ENSMUST00000206864 949 ntBASIC12.16□□□□□ -0.46
P06344 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.16□□□□□ -0.46
P06344 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
P06344 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.16□□□□□ -0.46
P06344 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06344 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06344 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06344 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06344 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
P06344 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06344 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06344 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06344 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
P06344 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
P06344 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06344 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.16□□□□□ -0.46
P06344 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.16□□□□□ -0.46
P06344 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06344 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P06344 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P06344 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P06344 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
P06344 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
P06344 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
P06344 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
P06344 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.15□□□□□ -0.46
P06344 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
P06344 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
P06344 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
P06344 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.15□□□□□ -0.46
P06344 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
P06344 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
P06344 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.15□□□□□ -0.46
P06344 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.15□□□□□ -0.46
P06344 Gm15678-201ENSMUST00000117573 960 ntBASIC12.15□□□□□ -0.46
P06344 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P06344 Gm11918-201ENSMUST00000121660 179 ntBASIC12.15□□□□□ -0.46
P06344 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.15□□□□□ -0.46
P06344 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
P06344 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.15□□□□□ -0.46
P06344 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.15□□□□□ -0.46
P06344 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
P06344 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
P06344 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P06344 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P06344 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.15□□□□□ -0.46
P06344 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P06344 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P06344 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
P06344 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.15□□□□□ -0.46
P06344 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.15□□□□□ -0.46
P06344 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P06344 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
P06344 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.15□□□□□ -0.46
P06344 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
P06344 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
P06344 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
P06344 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
P06344 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
P06344 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.47
P06344 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
P06344 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
P06344 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
P06344 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
P06344 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P06344 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
P06344 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
P06344 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P06344 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
P06344 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
P06344 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
P06344 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
P06344 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
P06344 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
P06344 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P06344 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P06344 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P06344 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
P06344 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.14□□□□□ -0.47
P06344 Gm26464-201ENSMUST00000157094 305 ntBASIC12.14□□□□□ -0.47
P06344 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.14□□□□□ -0.47
P06344 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
P06344 Gm27701-201ENSMUST00000184498 110 ntBASIC12.14□□□□□ -0.47
P06344 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.14□□□□□ -0.47
P06344 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.14□□□□□ -0.47
P06344 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.14□□□□□ -0.47
P06344 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.14□□□□□ -0.47
P06344 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.14□□□□□ -0.47
P06344 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P06344 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
P06344 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
P06344 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
P06344 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P06344 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P06344 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
P06344 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P06344 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P06344 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06344 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms