Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
TcraP01849 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
TcraP01849 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC9.96□□□□□ -0.82
TcraP01849 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
TcraP01849 Gm7114-201ENSMUST00000190159 1789 ntBASIC9.96□□□□□ -0.82
TcraP01849 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
TcraP01849 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC9.96□□□□□ -0.82
TcraP01849 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
TcraP01849 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
TcraP01849 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC9.95□□□□□ -0.82
TcraP01849 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
TcraP01849 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
TcraP01849 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC9.95□□□□□ -0.82
TcraP01849 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
TcraP01849 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
TcraP01849 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
TcraP01849 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
TcraP01849 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
TcraP01849 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
TcraP01849 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
TcraP01849 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
TcraP01849 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC9.95□□□□□ -0.82
TcraP01849 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
TcraP01849 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC9.95□□□□□ -0.82
TcraP01849 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC9.95□□□□□ -0.82
TcraP01849 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
TcraP01849 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
TcraP01849 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
TcraP01849 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
TcraP01849 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
TcraP01849 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
TcraP01849 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
TcraP01849 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
TcraP01849 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
TcraP01849 AC164565.1-201ENSMUST00000217520 1484 ntBASIC9.95□□□□□ -0.82
TcraP01849 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
TcraP01849 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
TcraP01849 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
TcraP01849 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
TcraP01849 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
TcraP01849 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
TcraP01849 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
TcraP01849 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC9.95□□□□□ -0.82
TcraP01849 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
TcraP01849 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
TcraP01849 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
TcraP01849 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
TcraP01849 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
TcraP01849 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
TcraP01849 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
TcraP01849 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
TcraP01849 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
TcraP01849 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
TcraP01849 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
TcraP01849 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
TcraP01849 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
TcraP01849 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
TcraP01849 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
TcraP01849 Gm28386-201ENSMUST00000189147 1849 ntBASIC9.94□□□□□ -0.82
TcraP01849 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
TcraP01849 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
TcraP01849 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC9.94□□□□□ -0.82
TcraP01849 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
TcraP01849 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
TcraP01849 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC9.94□□□□□ -0.82
TcraP01849 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
TcraP01849 Gm42670-201ENSMUST00000201816 1292 ntBASIC9.94□□□□□ -0.82
TcraP01849 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC9.94□□□□□ -0.82
TcraP01849 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC9.94□□□□□ -0.82
TcraP01849 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
TcraP01849 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
TcraP01849 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
TcraP01849 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
TcraP01849 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
TcraP01849 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
TcraP01849 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
TcraP01849 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
TcraP01849 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
TcraP01849 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
TcraP01849 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
TcraP01849 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
TcraP01849 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
TcraP01849 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
TcraP01849 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
TcraP01849 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
TcraP01849 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
TcraP01849 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
TcraP01849 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
TcraP01849 AC126549.2-201ENSMUST00000223997 1976 ntBASIC9.94□□□□□ -0.82
TcraP01849 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
TcraP01849 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
TcraP01849 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
TcraP01849 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC9.93□□□□□ -0.82
TcraP01849 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
TcraP01849 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
TcraP01849 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
TcraP01849 Gm44241-201ENSMUST00000203230 1662 ntBASIC9.93□□□□□ -0.82
TcraP01849 Gm45743-201ENSMUST00000212701 2795 ntBASIC9.93□□□□□ -0.82
TcraP01849 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
TcraP01849 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms