Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CopeO89079 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CopeO89079 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
CopeO89079 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CopeO89079 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CopeO89079 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CopeO89079 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CopeO89079 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CopeO89079 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CopeO89079 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CopeO89079 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CopeO89079 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CopeO89079 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CopeO89079 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CopeO89079 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CopeO89079 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CopeO89079 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CopeO89079 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CopeO89079 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CopeO89079 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CopeO89079 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CopeO89079 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.07□□□□□ -0.16
CopeO89079 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CopeO89079 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CopeO89079 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CopeO89079 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CopeO89079 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CopeO89079 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CopeO89079 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.07□□□□□ -0.16
CopeO89079 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
CopeO89079 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
CopeO89079 Gm9824-201ENSMUST00000178707 561 ntBASIC14.07□□□□□ -0.16
CopeO89079 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CopeO89079 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CopeO89079 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.07□□□□□ -0.16
CopeO89079 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CopeO89079 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CopeO89079 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CopeO89079 Mir497b-201ENSMUST00000093601 125 ntBASIC14.07□□□□□ -0.16
CopeO89079 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CopeO89079 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CopeO89079 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CopeO89079 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CopeO89079 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CopeO89079 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CopeO89079 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.07□□□□□ -0.16
CopeO89079 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
CopeO89079 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CopeO89079 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CopeO89079 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CopeO89079 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CopeO89079 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CopeO89079 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CopeO89079 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CopeO89079 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CopeO89079 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CopeO89079 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.06□□□□□ -0.16
CopeO89079 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.06□□□□□ -0.16
CopeO89079 Gm9719-201ENSMUST00000162765 543 ntBASIC14.06□□□□□ -0.16
CopeO89079 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CopeO89079 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.06□□□□□ -0.16
CopeO89079 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CopeO89079 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CopeO89079 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.06□□□□□ -0.16
CopeO89079 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CopeO89079 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
CopeO89079 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CopeO89079 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CopeO89079 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CopeO89079 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.06□□□□□ -0.16
CopeO89079 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.06□□□□□ -0.16
CopeO89079 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CopeO89079 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CopeO89079 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CopeO89079 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CopeO89079 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
CopeO89079 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CopeO89079 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CopeO89079 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
CopeO89079 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CopeO89079 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CopeO89079 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CopeO89079 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CopeO89079 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CopeO89079 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.05□□□□□ -0.16
CopeO89079 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CopeO89079 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CopeO89079 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CopeO89079 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.05□□□□□ -0.16
CopeO89079 Gm5566-201ENSMUST00000116118 459 ntBASIC14.05□□□□□ -0.16
CopeO89079 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.05□□□□□ -0.16
CopeO89079 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CopeO89079 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CopeO89079 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CopeO89079 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CopeO89079 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CopeO89079 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CopeO89079 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CopeO89079 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CopeO89079 Gm10175-201ENSMUST00000086013 645 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms